RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ENOSF1Q7L5Y1 443 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 VSTM4Q8IW00 320 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 ADGRF2Q8IZF7 708 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 VPS52Q8N1B4 723 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 TMEM86AQ8N2M4 240 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 FBXO22Q8NEZ5 403 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 ARNTL2Q8WYA1 636 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 TTPALQ9BTX7 342 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 NUP58Q9BVL2 599 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 VN1R3Q9BXE9 311 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 CYP3A43Q9HB55 503 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 NLRC4Q9NPP4 1024 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 STK39Q9UEW8 545 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.37□□□□□ -0.43
HPS4-212ENST00000481910 FHOD1Q9Y613 1164 aa12.37□□□□□ -0.43
HPS4-212ENST00000481910 TACC1O75410 805 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 SOD2P04179 222 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 CYP11A1P05108 521 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 TYMPP19971 482 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 FGFR3P22607 806 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 RFX1P22670 979 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 PAX7P23759 505 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 GTF2F1P35269 517 aaKnown RBP eCLIP12.36□□□□□ -0.43
HPS4-212ENST00000481910 YWHAHQ04917 246 aaPredicted RBP12.36□□□□□ -0.43
HPS4-212ENST00000481910 OVOS1Q6IE37 1185 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 IQCEQ6IPM2 695 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 CACNA2D4Q7Z3S7 1137 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 LIMS2Q7Z4I7 341 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 DRC7Q8IY82 874 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 RNF168Q8IYW5 571 aaPredicted RBP12.36□□□□□ -0.43
HPS4-212ENST00000481910 OR6B3Q8NGW1 331 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 CPLX3Q8WVH0 158 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 KREMEN1Q96MU8 473 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 MRPL45Q9BRJ2 306 aaKnown RBP12.36□□□□□ -0.43
HPS4-212ENST00000481910 SDCBP2Q9H190 292 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 GANQ9H2C0 597 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 SNX25Q9H3E2 840 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 CXorf56Q9H5V9 222 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 CISHQ9NSE2 258 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 OGFRQ9NZT2 677 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 FBXL5Q9UKA1 691 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 PLXNA4Q9HCM2 1894 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 ITIH6Q6UXX5 1313 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 VWA8A3KMH1 1905 aa12.36□□□□□ -0.43
HPS4-212ENST00000481910 MYO9BQ13459 2157 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 H0YHG0 523 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 H3BNC9 293 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 C2CD2LO14523 706 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 FAM163BP0C2L3 166 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 GNL1P36915 607 aaPredicted RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 YWHAEP62258 255 aaKnown RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 SARNPP82979 210 aaKnown RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 CCDC173Q0VFZ6 552 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 BIRC2Q13490 618 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 GPM6BQ13491 265 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 RTP2Q5QGT7 225 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 TMC6Q7Z403 805 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 THEM5Q8N1Q8 247 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 LSM14AQ8ND56 463 aaKnown RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 SPPL3Q8TCT6 385 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 KBTBD7Q8WVZ9 684 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 JAKMIP2Q96AA8 810 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 ZBTB9Q96C00 473 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 SPAG5Q96R06 1193 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 NAA15Q9BXJ9 866 aaKnown RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 CHST7Q9NS84 486 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 DDX43Q9NXZ2 648 aaKnown RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 CEP72Q9P209 647 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 AJAP1Q9UKB5 411 aaPredicted RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 LZTS1Q9Y250 596 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 DAAM1Q9Y4D1 1078 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 TRIOBPQ9H2D6 2365 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 A8MXQ7 604 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 GABRDO14764 452 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 OAZ2O95190 189 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 PDGFRBP09619 1106 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 WARSP23381 471 aaKnown RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 LMO2P25791 158 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 USP8P40818 1118 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 LHX1P48742 406 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 GLUD2P49448 558 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 UBE3AQ05086 875 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 DRAP1Q14919 205 aaPredicted RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 ZNF394Q53GI3 561 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 FIGNQ5HY92 759 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 ANKS3Q6ZW76 656 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 TMC7Q7Z402 723 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 TTC39CQ8N584 583 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 GOLGA6L1Q8N7Z2 621 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 POF1BQ8WVV4 589 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 RIN2Q8WYP3 895 aaPredicted RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 IQCDQ96DY2 449 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 PPP1R9BQ96SB3 815 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 HERC2P3Q9BVR0 1158 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 STK33Q9BYT3 514 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 FAM124BQ9H5Z6 455 aaPredicted RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 ZNF576Q9H609 170 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 MRPL17Q9NRX2 175 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms