RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 CHORDC1Q9UHD1 332 aaPredicted RBP16.73■□□□□ 0.27
RXRA-202ENST00000481739 IP6K2Q9UHH9 426 aa16.73■□□□□ 0.27
RXRA-202ENST00000481739 A0A1W2PQ45 241 aaPredicted RBP16.72■□□□□ 0.27
RXRA-202ENST00000481739 A0A1W2PQY0 241 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 KRT19P08727 400 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 CTSHP09668 335 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 CD58P19256 250 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 POLR2BP30876 1174 aaKnown RBP16.72■□□□□ 0.27
RXRA-202ENST00000481739 MARCKSL1P49006 195 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 MRPS25P82663 173 aaKnown RBP16.72■□□□□ 0.27
RXRA-202ENST00000481739 RBP5P82980 135 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 HLTFQ14527 1009 aaKnown RBP eCLIP16.72■□□□□ 0.27
RXRA-202ENST00000481739 SLC10A6Q3KNW5 377 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 MMS22LQ6ZRQ5 1243 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 TSPAN18Q96SJ8 248 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 ST7Q9NRC1 585 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 CDY2AQ9Y6F7 541 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 ANK1P16157 1881 aa16.72■□□□□ 0.27
RXRA-202ENST00000481739 ESYT3A0FGR9 886 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 PYGMP11217 842 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 THPOP40225 353 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 PTPN11Q06124 597 aaPredicted RBP16.71■□□□□ 0.27
RXRA-202ENST00000481739 WDR72Q3MJ13 1102 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 SLC27A1Q6PCB7 646 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 PASD1Q8IV76 773 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 RHOT1Q8IXI2 618 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 TMEM192Q8IY95 271 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 CXorf38Q8TB03 319 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 FEZF2Q8TBJ5 459 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 TMEM40Q8WWA1 233 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 WNT8BQ93098 351 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 BTBD6Q96KE9 485 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 HOMER3Q9NSC5 361 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 TRMT13Q9NUP7 481 aaKnown RBP16.71■□□□□ 0.27
RXRA-202ENST00000481739 TRPV2Q9Y5S1 764 aa16.71■□□□□ 0.27
RXRA-202ENST00000481739 ZSCAN5CA6NGD5 496 aaPredicted RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 FSCN2O14926 492 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 POLR3GO15318 223 aaPredicted RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 TTI1O43156 1089 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 CALCAP01258 141 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 ITGB3P05106 788 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 WEE2P0C1S8 567 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 HSPA9P38646 679 aaKnown RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 GSCP56915 257 aaPredicted RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 MTMR3Q13615 1198 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 NOTUMQ6P988 496 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 CTU1Q7Z7A3 348 aaKnown RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 EXOC4Q96A65 974 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 GDAP1L1Q96MZ0 367 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 ERP44Q9BS26 406 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 NXF1Q9UBU9 619 aaKnown RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 PARP2Q9UGN5 583 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 TLR3O15455 904 aaKnown RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 NPTXRO95502 500 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 RPLP2P05387 115 aaKnown RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 BRD2P25440 801 aaKnown RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 CETN2P41208 172 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 SPDYCQ5MJ68 293 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 LRRC38Q5VT99 294 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 PRELID2Q8N945 189 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 C3orf20Q8ND61 904 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 SLCO2A1Q92959 643 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 MAGOHBQ96A72 148 aaKnown RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 LRRC19Q9H756 370 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 PSD3Q9NYI0 1048 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 WDR35Q9P2L0 1181 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 KIAA1257Q9ULG3 409 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 PHF24Q9UPV7 400 aa16.7■□□□□ 0.26
RXRA-202ENST00000481739 PIN4Q9Y237 131 aaKnown RBP16.7■□□□□ 0.26
RXRA-202ENST00000481739 BRCA2P51587 3418 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 GOLGA8KD6RF30 607 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 CILPO75339 1184 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 SYF2O95926 243 aaKnown RBP16.69■□□□□ 0.26
RXRA-202ENST00000481739 CFHP08603 1231 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 HSPA8P11142 646 aaKnown RBP16.69■□□□□ 0.26
RXRA-202ENST00000481739 YARSP54577 528 aaKnown RBP16.69■□□□□ 0.26
RXRA-202ENST00000481739 INCA1Q0VD86 236 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 MYO1EQ12965 1108 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 PTK7Q13308 1070 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 DNAJC24Q6P3W2 148 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 SCARA5Q6ZMJ2 495 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 ERICH1Q86X53 443 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 KATNAL2Q8IYT4 538 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 C1orf131Q8NDD1 294 aaKnown RBP16.69■□□□□ 0.26
RXRA-202ENST00000481739 HPDLQ96IR7 371 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 SH3GL2Q99962 352 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 HINFPQ9BQA5 517 aa16.69■□□□□ 0.26
RXRA-202ENST00000481739 FEZ2Q9UHY8 353 aaPredicted RBP16.69■□□□□ 0.26
RXRA-202ENST00000481739 FAM170AA1A519 330 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 TMEM191CA6NGB0 347 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 DNM1LO00429 736 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 MEFVO15553 781 aaPredicted RBP16.68■□□□□ 0.26
RXRA-202ENST00000481739 RNF40O75150 1001 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 ECHS1P30084 290 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 HOXA11P31270 313 aaPredicted RBP16.68■□□□□ 0.26
RXRA-202ENST00000481739 GGCXP38435 758 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 PIGHQ14442 188 aaPredicted RBP16.68■□□□□ 0.26
RXRA-202ENST00000481739 STILQ15468 1287 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 CFAP58Q5T655 872 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms