RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ICAM4Q14773 271 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 ARL13BQ3SXY8 428 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 SLC44A4Q53GD3 710 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 ZDHHC24Q6UX98 284 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 OR56A1Q8NGH5 318 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 IQCDQ96DY2 449 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 TEPSINQ96N21 525 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 CNPPD1Q9BV87 410 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 TEX101Q9BY14 249 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.28□□□□□ -1.4
UPF3A-207ENST00000481131 CHST2Q9Y4C5 530 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 DNMBPQ6XZF7 1577 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 TOPBP1Q92547 1522 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 NBNO60934 754 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 FOSP01100 380 aaPredicted RBP6.27□□□□□ -1.41
UPF3A-207ENST00000481131 TXNP10599 105 aaKnown RBP6.27□□□□□ -1.41
UPF3A-207ENST00000481131 CARSP49589 748 aaKnown RBP6.27□□□□□ -1.41
UPF3A-207ENST00000481131 MAPK10P53779 464 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 RNASE9P60153 205 aaKnown RBP6.27□□□□□ -1.41
UPF3A-207ENST00000481131 HHEXQ03014 270 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 TNFAIP2Q03169 654 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 TRIM14Q14142 442 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 INO80DQ53TQ3 878 aaPredicted RBP6.27□□□□□ -1.41
UPF3A-207ENST00000481131 TSHZ3Q63HK5 1081 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 TAPT1Q6NXT6 567 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 GSPT2Q8IYD1 628 aaKnown RBP6.27□□□□□ -1.41
UPF3A-207ENST00000481131 ZNF483Q8TF39 744 aaPredicted RBP6.27□□□□□ -1.41
UPF3A-207ENST00000481131 C18orf8Q96DM3 657 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 GDF15Q99988 308 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 ZSWIM1Q9BR11 485 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 TTLL2Q9BWV7 592 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 STK31Q9BXU1 1019 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 GPR87Q9BY21 358 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 MS4A7Q9GZW8 240 aaPredicted RBP6.27□□□□□ -1.41
UPF3A-207ENST00000481131 SIK2Q9H0K1 926 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 CD248Q9HCU0 757 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 CTTNBP2NLQ9P2B4 639 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 RGS17Q9UGC6 210 aaPredicted RBP6.27□□□□□ -1.41
UPF3A-207ENST00000481131 LRCH1Q9Y2L9 728 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 USP15Q9Y4E8 981 aaPredicted RBP6.27□□□□□ -1.41
UPF3A-207ENST00000481131 PAXBP1Q9Y5B6 917 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 AATKQ6ZMQ8 1374 aa6.27□□□□□ -1.41
UPF3A-207ENST00000481131 CUX1P39880 1505 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 A0A087WZ62 844 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 POLRMTO00411 1230 aaKnown RBP6.26□□□□□ -1.41
UPF3A-207ENST00000481131 PIP5K1CO60331 668 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 ZNF623O75123 536 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 ITGB3P05106 788 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 CHRM3P20309 590 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 EEF1GP26641 437 aaKnown RBP6.26□□□□□ -1.41
UPF3A-207ENST00000481131 VIPR2P41587 438 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 MXRA7P84157 204 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 PDCD4Q53EL6 469 aaKnown RBP6.26□□□□□ -1.41
UPF3A-207ENST00000481131 RRAGBQ5VZM2 374 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 LRRC55Q6ZSA7 311 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 Q8NA96 180 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 RAPGEF4Q8WZA2 1011 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 TMEM41AQ96HV5 264 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 SMOC2Q9H3U7 446 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 SERHLQ9NQF3 203 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 MID2Q9UJV3 735 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 ITGB1BP2Q9UKP3 347 aa6.26□□□□□ -1.41
UPF3A-207ENST00000481131 A0A1B0GTW7 788 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 CLCA1A8K7I4 914 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 MYO1CO00159 1063 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 ADAMTS3O15072 1205 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 THAP12O43422 761 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 CREB3O43889 395 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 FOXD2O60548 495 aaPredicted RBP6.25□□□□□ -1.41
UPF3A-207ENST00000481131 PLA2G6O60733 806 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 ELANEP08246 267 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 FGFR4P22455 802 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 TECP42680 631 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 MAN2A2P49641 1150 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 MC2RQ01718 297 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 OCA2Q04671 838 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 AMOTQ4VCS5 1084 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 ANO1Q5XXA6 986 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 TAF2Q6P1X5 1199 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 CCDC174Q6PII3 467 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 SLC30A10Q6XR72 485 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 CATSPERGQ6ZRH7 1159 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 RNF44Q7L0R7 432 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 MYLK4Q86YV6 388 aaPredicted RBP6.25□□□□□ -1.41
UPF3A-207ENST00000481131 SYTL1Q8IYJ3 562 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 TXLNBQ8N3L3 684 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 PSD4Q8NDX1 1056 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 POC1BQ8TC44 478 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 SPSB4Q96A44 273 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 SLC46A1Q96NT5 459 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 TRIB1Q96RU8 372 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 PNKPQ96T60 521 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 SMOQ99835 787 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 MESP1Q9BRJ9 268 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 TTYH3Q9C0H2 523 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 TBC1D23Q9NUY8 699 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 SYNJ1O43426 1573 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 BIVM-ERCC5R4GMW8 1640 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 XDHP47989 1333 aa6.25□□□□□ -1.41
UPF3A-207ENST00000481131 GOLGA6L6A8MZA4 724 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms