RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 HCN4Q9Y3Q4 1203 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 PCDHB5Q9Y5E4 795 aa21.62■■□□□ 1.05
VPS36-204ENST00000480923 NARSO43776 548 aaKnown RBP21.61■■□□□ 1.05
VPS36-204ENST00000480923 CLSTN1O94985 981 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 NR2F2P24468 414 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 AP3M2P53677 418 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 PARM1Q6UWI2 310 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 MTSS1LQ765P7 747 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 DPH6Q7L8W6 267 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 SUGP1Q8IWZ8 645 aaKnown RBP21.61■■□□□ 1.05
VPS36-204ENST00000480923 FGF14Q92915 247 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 GSDMAQ96QA5 445 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 DNAJC25Q9H1X3 360 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 TMLHEQ9NVH6 421 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 GDE1Q9NZC3 331 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 PCDHA5Q9Y5H7 936 aa21.61■■□□□ 1.05
VPS36-204ENST00000480923 GABRDO14764 452 aa21.6■■□□□ 1.05
VPS36-204ENST00000480923 KINO60870 393 aaKnown RBP21.6■■□□□ 1.05
VPS36-204ENST00000480923 GADD45BO75293 160 aaPredicted RBP21.6■■□□□ 1.05
VPS36-204ENST00000480923 RPL13P26373 211 aaKnown RBP21.6■■□□□ 1.05
VPS36-204ENST00000480923 PCSK1P29120 753 aa21.6■■□□□ 1.05
VPS36-204ENST00000480923 CCR2P41597 374 aa21.6■■□□□ 1.05
VPS36-204ENST00000480923 MYL6P60660 151 aa21.6■■□□□ 1.05
VPS36-204ENST00000480923 TNNC1P63316 161 aa21.6■■□□□ 1.05
VPS36-204ENST00000480923 VEPH1Q14D04 833 aa21.6■■□□□ 1.05
VPS36-204ENST00000480923 NFE2Q16621 373 aaPredicted RBP21.6■■□□□ 1.05
VPS36-204ENST00000480923 NFIL3Q16649 462 aa21.6■■□□□ 1.05
VPS36-204ENST00000480923 INTS6LQ5JSJ4 861 aaKnown RBP21.6■■□□□ 1.05
VPS36-204ENST00000480923 SYAP1Q96A49 352 aaPredicted RBP21.6■■□□□ 1.05
VPS36-204ENST00000480923 FBXL21Q9UKT6 434 aa21.6■■□□□ 1.05
VPS36-204ENST00000480923 ASB3Q9Y575 518 aa21.6■■□□□ 1.05
VPS36-204ENST00000480923 HCRTO43612 131 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 TECTAO75443 2155 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 MICAL2O94851 1124 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 HAPLN1P10915 354 aaPredicted RBP21.59■■□□□ 1.05
VPS36-204ENST00000480923 GJA1P17302 382 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 EPHA5P54756 1037 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 DLG4P78352 724 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 ADAM9Q13443 819 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 WDR72Q3MJ13 1102 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 ZNF658Q5TYW1 1059 aaPredicted RBP21.59■■□□□ 1.05
VPS36-204ENST00000480923 TDRD10Q5VZ19 366 aaKnown RBP21.59■■□□□ 1.05
VPS36-204ENST00000480923 LIMS2Q7Z4I7 341 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 ITIH5Q86UX2 942 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 FBXL6Q8N531 539 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 TMC2Q8TDI7 906 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 KBTBD7Q8WVZ9 684 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 LPIN3Q9BQK8 851 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 PI4K2AQ9BTU6 479 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 RPP25Q9BUL9 199 aaKnown RBP21.59■■□□□ 1.05
VPS36-204ENST00000480923 GTF3C4Q9UKN8 822 aa21.59■■□□□ 1.05
VPS36-204ENST00000480923 AKAP3O75969 853 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 PDGFBP01127 241 aaPredicted RBP21.58■■□□□ 1.05
VPS36-204ENST00000480923 CFHP08603 1231 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 SRFP11831 508 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 WARSP23381 471 aaKnown RBP21.58■■□□□ 1.05
VPS36-204ENST00000480923 ATICP31939 592 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 CLDN10P78369 228 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 TAF12Q16514 161 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 DNAJB7Q7Z6W7 309 aaPredicted RBP21.58■■□□□ 1.05
VPS36-204ENST00000480923 FAM186BQ8IYM0 893 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 PSMG2Q969U7 264 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 KXD1Q9BQD3 176 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 SYT15Q9BQS2 421 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 SNX25Q9H3E2 840 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 MFSD1Q9H3U5 465 aa21.58■■□□□ 1.05
VPS36-204ENST00000480923 NXF1Q9UBU9 619 aaKnown RBP21.58■■□□□ 1.05
VPS36-204ENST00000480923 MAPK13O15264 365 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 MOSPD3O75425 235 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 STAU1O95793 577 aaKnown RBP21.57■■□□□ 1.04
VPS36-204ENST00000480923 C4BPAP04003 597 aaKnown RBP21.57■■□□□ 1.04
VPS36-204ENST00000480923 PDGFRBP09619 1106 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 KRT13P13646 458 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 ATF6P18850 670 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 LMO2P25791 158 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 PSMC2P35998 433 aaKnown RBP21.57■■□□□ 1.04
VPS36-204ENST00000480923 PRCPP42785 496 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 VAMP7P51809 220 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 NCOA4Q13772 614 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 ZNF699Q32M78 642 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 ZCWPW2Q504Y3 356 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 TMC8Q8IU68 726 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 SPATA2LQ8IUW3 424 aaPredicted RBP21.57■■□□□ 1.04
VPS36-204ENST00000480923 SPATA20Q8TB22 786 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 GIPC2Q8TF65 315 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 MRPL45Q9BRJ2 306 aaKnown RBP21.57■■□□□ 1.04
VPS36-204ENST00000480923 LRRC3Q9BY71 257 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 GTPBP4Q9BZE4 634 aaKnown RBP21.57■■□□□ 1.04
VPS36-204ENST00000480923 XYLT2Q9H1B5 865 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 SLITRK6Q9H5Y7 841 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 CDH9Q9ULB4 789 aa21.57■■□□□ 1.04
VPS36-204ENST00000480923 A0A1W2PRU2 124 aa21.56■■□□□ 1.04
VPS36-204ENST00000480923 NRG2O14511 850 aaPredicted RBP21.56■■□□□ 1.04
VPS36-204ENST00000480923 PSMC1P62191 440 aaKnown RBP21.56■■□□□ 1.04
VPS36-204ENST00000480923 TEAD2Q15562 447 aa21.56■■□□□ 1.04
VPS36-204ENST00000480923 CCDC142Q17RM4 750 aa21.56■■□□□ 1.04
VPS36-204ENST00000480923 EDRF1Q3B7T1 1238 aa21.56■■□□□ 1.04
VPS36-204ENST00000480923 POTEHQ6S545 545 aa21.56■■□□□ 1.04
VPS36-204ENST00000480923 INTS8Q75QN2 995 aaKnown RBP21.56■■□□□ 1.04
VPS36-204ENST00000480923 ELOA2Q8IYF1 753 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms