RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 ITIH5Q86UX2 942 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 SIX5Q8N196 739 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 ST13P5Q8NFI4 369 aaPredicted RBP18.27■□□□□ 0.52
HSPG2-209ENST00000480900 PSMG2Q969U7 264 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 CCDC127Q96BQ5 260 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 ACBD6Q9BR61 282 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 LRRC3Q9BY71 257 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 DMAC2Q9NW81 257 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 GREB1Q4ZG55 1949 aa18.27■□□□□ 0.51
HSPG2-209ENST00000480900 GABRDO14764 452 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 MOSPD3O75425 235 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 LHX1P48742 406 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 CLCN5P51795 746 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 NUBP1P53384 320 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 KCNB1Q14721 858 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 NFE2Q16621 373 aaPredicted RBP18.26■□□□□ 0.51
HSPG2-209ENST00000480900 SOWAHAQ2M3V2 549 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 MGAT5BQ3V5L5 792 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 POTEHQ6S545 545 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 TMC8Q8IU68 726 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 ADGRF2Q8IZF7 708 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 GPR152Q8TDT2 470 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 SEPT5Q99719 369 aaPredicted RBP18.26■□□□□ 0.51
HSPG2-209ENST00000480900 KXD1Q9BQD3 176 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 GZF1Q9H116 711 aaPredicted RBP18.26■□□□□ 0.51
HSPG2-209ENST00000480900 DDX43Q9NXZ2 648 aaKnown RBP18.26■□□□□ 0.51
HSPG2-209ENST00000480900 PCDHB5Q9Y5E4 795 aa18.26■□□□□ 0.51
HSPG2-209ENST00000480900 GOLGA6L4A6NEF3 574 aa18.25■□□□□ 0.51
HSPG2-209ENST00000480900 NRG2O14511 850 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-209ENST00000480900 SOAT2O75908 522 aa18.25■□□□□ 0.51
HSPG2-209ENST00000480900 FGF19O95750 216 aa18.25■□□□□ 0.51
HSPG2-209ENST00000480900 NR3C1P04150 777 aa18.25■□□□□ 0.51
HSPG2-209ENST00000480900 HAPLN1P10915 354 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-209ENST00000480900 NPR3P17342 541 aa18.25■□□□□ 0.51
HSPG2-209ENST00000480900 PCSK1P29120 753 aa18.25■□□□□ 0.51
HSPG2-209ENST00000480900 VEPH1Q14D04 833 aa18.25■□□□□ 0.51
HSPG2-209ENST00000480900 INTS6LQ5JSJ4 861 aaKnown RBP18.25■□□□□ 0.51
HSPG2-209ENST00000480900 IER5LQ5T953 404 aa18.25■□□□□ 0.51
HSPG2-209ENST00000480900 CWF19L1Q69YN2 538 aaKnown RBP18.25■□□□□ 0.51
HSPG2-209ENST00000480900 DNAJB7Q7Z6W7 309 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-209ENST00000480900 FMR1NBQ8N0W7 255 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-209ENST00000480900 SHKBP1Q8TBC3 707 aa18.25■□□□□ 0.51
HSPG2-209ENST00000480900 ASB16Q96NS5 453 aa18.25■□□□□ 0.51
HSPG2-209ENST00000480900 ABI2Q9NYB9 513 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-209ENST00000480900 KRBA1A5PL33 1030 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 ATF6P18850 670 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 FCARP24071 287 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 AP3M2P53677 418 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 GPC5P78333 572 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 CLDN10P78369 228 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 FAM78AQ5JUQ0 283 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 OSTM1Q86WC4 334 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 TMEM105Q8N8V8 129 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 PARD3BQ8TEW8 1205 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 ZNF516Q92618 1163 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 SMARCD2Q92925 531 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 ELSPBP1Q96BH3 223 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 PKMYT1Q99640 499 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 GPR88Q9GZN0 384 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 ZFP14Q9HCL3 533 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 ABCB6Q9NP58 842 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 ARHGEF3Q9NR81 526 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 TMLHEQ9NVH6 421 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 TRAF3IP3Q9Y228 551 aa18.24■□□□□ 0.51
HSPG2-209ENST00000480900 TICRRQ7Z2Z1 1910 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 ANAPC1Q9H1A4 1944 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 CACNA1IQ9P0X4 2223 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 MYH10P35580 1976 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 CALUO43852 315 aaPredicted RBP18.23■□□□□ 0.51
HSPG2-209ENST00000480900 STAU1O95793 577 aaKnown RBP18.23■□□□□ 0.51
HSPG2-209ENST00000480900 GJA1P17302 382 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 AOC1P19801 751 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 ACAT1P24752 427 aaKnown RBP18.23■□□□□ 0.51
HSPG2-209ENST00000480900 PFKPQ01813 784 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 TEAD2Q15562 447 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 NFIL3Q16649 462 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 TANGO2Q6ICL3 276 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 GAREM2Q75VX8 874 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 GUF1Q8N442 669 aaKnown RBP18.23■□□□□ 0.51
HSPG2-209ENST00000480900 PRSS33Q8NF86 280 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 FLCNQ8NFG4 579 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 FAM200AQ8TCP9 573 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 PLEKHO2Q8TD55 490 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 KBTBD7Q8WVZ9 684 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 ZSWIM3Q96MP5 696 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 LPIN3Q9BQK8 851 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 TRPV4Q9HBA0 871 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 ZNF334Q9HCZ1 680 aaPredicted RBP18.23■□□□□ 0.51
HSPG2-209ENST00000480900 CA14Q9ULX7 337 aa18.23■□□□□ 0.51
HSPG2-209ENST00000480900 A0A1W2PRU2 124 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 LRRIQ3A6PVS8 624 aaPredicted RBP18.22■□□□□ 0.51
HSPG2-209ENST00000480900 CST3P01034 146 aaPredicted RBP18.22■□□□□ 0.51
HSPG2-209ENST00000480900 FAM163BP0C2L3 166 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 WARSP23381 471 aaKnown RBP18.22■□□□□ 0.51
HSPG2-209ENST00000480900 ATICP31939 592 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 CASP4P49662 377 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 CDR1P51861 262 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 PTPN5P54829 565 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 FAM160A1Q05DH4 1040 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 TRPC3Q13507 836 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms