RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 FAM78AQ5JUQ0 283 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 TANGO2Q6ICL3 276 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 PHLDB3Q6NSJ2 640 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 DNAJB7Q7Z6W7 309 aaPredicted RBP16.48■□□□□ 0.23
CDK9-203ENST00000480353 ADGRF2Q8IZF7 708 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 PDCL2Q8N4E4 241 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 TTC9BQ8N6N2 239 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 TOP6BLQ8N6T0 577 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 ZSCAN18Q8TBC5 510 aaPredicted RBP16.48■□□□□ 0.23
CDK9-203ENST00000480353 SMARCD2Q92925 531 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 PSMG2Q969U7 264 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 HPDLQ96IR7 371 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 MMS19Q96T76 1030 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 TRMT61BQ9BVS5 477 aaKnown RBP16.48■□□□□ 0.23
CDK9-203ENST00000480353 CRISPLD1Q9H336 500 aa16.48■□□□□ 0.23
CDK9-203ENST00000480353 PI15O43692 258 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 ACTN4O43707 911 aaKnown RBP16.47■□□□□ 0.23
CDK9-203ENST00000480353 VNN2O95498 520 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 GABRR2P28476 465 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 PCSK1P29120 753 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 CDC25CP30307 473 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 HOXD11P31277 338 aaPredicted RBP16.47■□□□□ 0.23
CDK9-203ENST00000480353 HOXD13P35453 343 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 MRE11P49959 708 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 EPHA5P54756 1037 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 PRKCQQ04759 706 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 GRM2Q14416 872 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 UBXN2BQ14CS0 331 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 KMT5BQ4FZB7 885 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 DTWD2Q8NBA8 298 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 SHKBP1Q8TBC3 707 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 GIPC2Q8TF65 315 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 E2F7Q96AV8 911 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 BORCS6Q96GS4 357 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 ASB16Q96NS5 453 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 CGRRF1Q99675 332 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 LPIN3Q9BQK8 851 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 ACBD6Q9BR61 282 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 FAM86C1Q9NVL1 165 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 GDAP2Q9NXN4 497 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 L1RE1Q9UN81 338 aa16.47■□□□□ 0.23
CDK9-203ENST00000480353 ZNF638Q14966 1978 aaKnown RBP16.47■□□□□ 0.23
CDK9-203ENST00000480353 TGFB1I1O43294 461 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 ACAT1P24752 427 aaKnown RBP16.46■□□□□ 0.23
CDK9-203ENST00000480353 TNNC1P63316 161 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 CYP24A1Q07973 514 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 EHHADHQ08426 723 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 BMT2Q1RMZ1 405 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 TPRG1Q6ZUI0 275 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 SPATA2LQ8IUW3 424 aaPredicted RBP16.46■□□□□ 0.23
CDK9-203ENST00000480353 CCDC105Q8IYK2 499 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 OR5B17Q8NGF7 314 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 SPATA18Q8TC71 538 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 DEPDC1BQ8WUY9 529 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 IRF7Q92985 503 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 FAM84AQ96KN4 292 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 PI4K2AQ9BTU6 479 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 PLA2G2FQ9BZM2 168 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 DNAJC25Q9H1X3 360 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 MRPS17Q9Y2R5 130 aaKnown RBP16.46■□□□□ 0.23
CDK9-203ENST00000480353 ZDHHC9Q9Y397 364 aa16.46■□□□□ 0.23
CDK9-203ENST00000480353 KANSL1LA0AUZ9 987 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 ZNF263O14978 683 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 NCAM2O15394 837 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 CALUO43852 315 aaPredicted RBP16.45■□□□□ 0.22
CDK9-203ENST00000480353 RPN1P04843 607 aaKnown RBP16.45■□□□□ 0.22
CDK9-203ENST00000480353 DCNP07585 359 aaKnown RBP16.45■□□□□ 0.22
CDK9-203ENST00000480353 HAPLN1P10915 354 aaPredicted RBP16.45■□□□□ 0.22
CDK9-203ENST00000480353 PSMC3P17980 439 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 GDI1P31150 447 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 NDUFA8P51970 172 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 STARD6P59095 220 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 RPL10AP62906 217 aaKnown RBP16.45■□□□□ 0.22
CDK9-203ENST00000480353 BIRC3Q13489 604 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 PSMD6Q15008 389 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 INTS6LQ5JSJ4 861 aaKnown RBP16.45■□□□□ 0.22
CDK9-203ENST00000480353 GPR158Q5T848 1215 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 C4orf50Q6ZRC1 276 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 DPH6Q7L8W6 267 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 TRAPPC11Q7Z392 1133 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 LRRTM3Q86VH5 581 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 TMC8Q8IU68 726 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 PJA1Q8NG27 643 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 CSGALNACT1Q8TDX6 532 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 CHAMP1Q96JM3 812 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 ZSWIM3Q96MP5 696 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 BCO2Q9BYV7 579 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 FOXQ1Q9C009 403 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 SNX25Q9H3E2 840 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 SIX4Q9UIU6 781 aa16.45■□□□□ 0.22
CDK9-203ENST00000480353 MAGED2Q9UNF1 606 aaPredicted RBP16.45■□□□□ 0.22
CDK9-203ENST00000480353 CSH1P0DML2 217 aa16.44■□□□□ 0.22
CDK9-203ENST00000480353 CSH2P0DML3 217 aa16.44■□□□□ 0.22
CDK9-203ENST00000480353 VIPR2P41587 438 aa16.44■□□□□ 0.22
CDK9-203ENST00000480353 NUCB2P80303 420 aa16.44■□□□□ 0.22
CDK9-203ENST00000480353 STK4Q13043 487 aa16.44■□□□□ 0.22
CDK9-203ENST00000480353 ANGPT1Q15389 498 aa16.44■□□□□ 0.22
CDK9-203ENST00000480353 MAPRE1Q15691 268 aaKnown RBP16.44■□□□□ 0.22
CDK9-203ENST00000480353 ZNF852Q6ZMS4 543 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms