RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 CAPN15O75808 1086 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 LMO2P25791 158 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 PBX3P40426 434 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 FMO1Q01740 532 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 PLCB3Q01970 1234 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 STILQ15468 1287 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 SLC18A3Q16572 532 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 TDRD12Q587J7 1177 aaKnown RBP17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 OVOS1Q6IE37 1185 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 METTL23Q86XA0 190 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 OR6B3Q8NGW1 331 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 ZNF606Q8WXB4 792 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 TNIP3Q96KP6 325 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 CCDC42Q96M95 316 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 ZNF830Q96NB3 372 aaPredicted RBP17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 EIF3CQ99613 913 aaKnown RBP17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 PKMYT1Q99640 499 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 VN1R3Q9BXE9 311 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 DDX43Q9NXZ2 648 aaKnown RBP17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 SPG21Q9NZD8 308 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 CDH9Q9ULB4 789 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 RWDD3Q9Y3V2 267 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 EPN1Q9Y6I3 576 aaPredicted RBP17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 VWA8A3KMH1 1905 aa17.93■□□□□ 0.46
SCAMP3-207ENST00000480219 NT5C1B-RDH14C9J2C7 533 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 O00370 1275 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 DDX3XO00571 662 aaKnown RBP eCLIP17.92■□□□□ 0.464e-11■■■■□ 20.8
SCAMP3-207ENST00000480219 NDUFA10O95299 355 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 PCSK1P29120 753 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 TKTP29401 623 aaKnown RBP17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 CDH5P33151 784 aaPredicted RBP17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 CYLC1P35663 651 aaPredicted RBP17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 KIF11P52732 1056 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 YWHAHQ04917 246 aaPredicted RBP17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 CNGA2Q16280 664 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 TRIM72Q6ZMU5 477 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 B3GALNT2Q8NCR0 500 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 LNX1Q8TBB1 728 aaPredicted RBP17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 SLC20A1Q8WUM9 679 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 TFAP2BQ92481 460 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 HERC2P3Q9BVR0 1158 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 PLVAPQ9BX97 442 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 UBE2OQ9C0C9 1292 aaKnown RBP17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 PRO3102Q9H379 93 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 PCDHA11Q9Y5I1 949 aa17.92■□□□□ 0.46
SCAMP3-207ENST00000480219 CEP290O15078 2479 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 A0A087X0T9 212 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 LCHNA4D1U4 455 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 C5orf67F2Z3F1 127 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 ZNF263O14978 683 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 MED7O43513 233 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 SOD2P04179 222 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 CYP1A1P04798 512 aaPredicted RBP17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 FAM228BP0C875 321 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 GZMAP12544 262 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 MTF1Q14872 753 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 USP41Q3LFD5 358 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 ZNF394Q53GI3 561 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 VARS2Q5ST30 1063 aaKnown RBP17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 FAM171A1Q5VUB5 890 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 KIAA0319Q5VV43 1072 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 FAM171BQ6P995 826 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 LCLAT1Q6UWP7 414 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 DDX53Q86TM3 631 aaKnown RBP17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 VPS36Q86VN1 386 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 PIK3R5Q8WYR1 880 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 TMEM169Q96HH4 297 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 LHX5Q9H2C1 402 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 DPEP3Q9H4B8 488 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 KCND1Q9NSA2 647 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 PCDHB12Q9Y5F1 795 aa17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 TIMM13Q9Y5L4 95 aaPredicted RBP17.91■□□□□ 0.46
SCAMP3-207ENST00000480219 LINC01553A4QN01 128 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 THAP12O43422 761 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 HCRTO43612 131 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 LSM8O95777 96 aaKnown RBP17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 MMEP08473 750 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 PTPN1P18031 435 aaKnown RBP17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 BMPR1AP36894 532 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 PKDCCQ504Y2 493 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 SGO2Q562F6 1265 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 INTS6LQ5JSJ4 861 aaKnown RBP17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 SPOUT1Q5T280 376 aaKnown RBP17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 FAM109BQ6ICB4 259 aaPredicted RBP17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 ANKS3Q6ZW76 656 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 ACOT1Q86TX2 421 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 GPIHBP1Q8IV16 184 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 GLYCTKQ8IVS8 523 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 THEM5Q8N1Q8 247 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 TRIM44Q96DX7 344 aaPredicted RBP17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 SAMD11Q96NU1 681 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 PCDHB18PQ96TA0 734 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 SYT15Q9BQS2 421 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 TTPALQ9BTX7 342 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 CRTAC1Q9NQ79 661 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 ADAMTS1Q9UHI8 967 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 NAGPAQ9UK23 515 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 LZTS1Q9Y250 596 aa17.9■□□□□ 0.46
SCAMP3-207ENST00000480219 BACE2Q9Y5Z0 518 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms