RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 DNAL1Q4LDG9 190 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 ARMC3Q5W041 872 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 B3GNT9Q6UX72 402 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 KYAT3Q6YP21 454 aaKnown RBP14.25□□□□□ -0.13
C9orf78-205ENST00000480023 MON1BQ7L1V2 547 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 ATP11CQ8NB49 1132 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 NAT14Q8WUY8 206 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 PAFAH2Q99487 392 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 NMUR2Q9GZQ4 415 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 TMEM8AQ9HCN3 771 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 CNTN3Q9P232 1028 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 FARP1Q9Y4F1 1045 aaPredicted RBP14.25□□□□□ -0.13
C9orf78-205ENST00000480023 GMEB1Q9Y692 573 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.25□□□□□ -0.13
C9orf78-205ENST00000480023 QSER1Q2KHR3 1735 aa14.25□□□□□ -0.13
C9orf78-205ENST00000480023 ARHGEF35A5YM69 484 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 B2RBV5 119 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 CHMP2AO43633 222 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 ATP9BO43861 1147 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 FKBP6O75344 327 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 CIB2O75838 187 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 ZSCAN5DPP0CG00 497 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 MYL2P10916 166 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 GLRA2P23416 452 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 GPSM2P81274 684 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 GCNT1Q02742 428 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 NFX1Q12986 1120 aaKnown RBP14.24□□□□□ -0.13
C9orf78-205ENST00000480023 OASLQ15646 514 aaKnown RBP14.24□□□□□ -0.13
C9orf78-205ENST00000480023 HP1BP3Q5SSJ5 553 aaPredicted RBP14.24□□□□□ -0.13
C9orf78-205ENST00000480023 AAGABQ6PD74 315 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 CAPN12Q6ZSI9 719 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 ENOSF1Q7L5Y1 443 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 TRIM74Q86UV6 250 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 TRIM73Q86UV7 250 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 ULK2Q8IYT8 1036 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 ZSWIM2Q8NEG5 633 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 DCAKDQ8WVC6 231 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 WDR11Q9BZH6 1224 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 PCDH9Q9HC56 1237 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 KCNK4Q9NYG8 393 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 ZNF148Q9UQR1 794 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 ATP2B4P23634 1241 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 RPL26P61254 145 aaKnown RBP14.24□□□□□ -0.13
C9orf78-205ENST00000480023 GTF2BQ00403 316 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 CDK18Q07002 472 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 HIF1AQ16665 826 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 PHLDB2Q86SQ0 1253 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 PDSS2Q86YH6 399 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 RBM15BQ8NDT2 890 aaKnown RBP14.24□□□□□ -0.13
C9orf78-205ENST00000480023 FBXL13Q8NEE6 735 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 DHX38Q92620 1227 aaKnown RBP14.24□□□□□ -0.13
C9orf78-205ENST00000480023 NKD2Q969F2 451 aaPredicted RBP14.24□□□□□ -0.13
C9orf78-205ENST00000480023 C1orf21Q9H246 121 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 NDUFA13Q9P0J0 144 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 SLC7A8Q9UHI5 535 aa14.24□□□□□ -0.13
C9orf78-205ENST00000480023 E7ESA3 106 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 H3BRJ5 948 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 GAS7O60861 476 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 ATP5BP06576 529 aaKnown RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 ITGAVP06756 1048 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 EEF2P13639 858 aaKnown RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 TSHRP16473 764 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 CD58P19256 250 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 HOXA13P31271 388 aaPredicted RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 RBM5P52756 815 aaKnown RBP eCLIP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 NOP14P78316 857 aaKnown RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 XIAPP98170 497 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 SLC18A2Q05940 514 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 TFDP1Q14186 410 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 EFTUD2Q15029 972 aaKnown RBP eCLIP14.23□□□□□ -0.137e-7■■■■■ 38.1
C9orf78-205ENST00000480023 TBCCQ15814 346 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 USH1GQ495M9 461 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 CIAPIN1Q6FI81 312 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 CCDC174Q6PII3 467 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 SLC30A10Q6XR72 485 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 PCGF5Q86SE9 256 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 NLRX1Q86UT6 975 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 NCAPG2Q86XI2 1143 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 RCOR2Q8IZ40 523 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 LZICQ8WZA0 190 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 MRRFQ96E11 262 aaKnown RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 APOPT1Q96IL0 206 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 LXNQ9BS40 222 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 RAB20Q9NX57 234 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 CIDEBQ9UHD4 219 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 STRIP2Q9ULQ0 834 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 IPO5O00410 1097 aaKnown RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 ZSCAN9O15535 394 aaPredicted RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 AP1G1O43747 822 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 LPXNO60711 386 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 UFL1O94874 794 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 GTF2H1P32780 548 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 PTPN7P35236 360 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 NSFP46459 744 aaKnown RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 VCPP55072 806 aaKnown RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 PADI6Q6TGC4 694 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 SH2D5Q6ZV89 423 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 TREML1Q86YW5 311 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 OR6Y1Q8NGX8 325 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 HIC2Q96JB3 615 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms