RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 CLCN6P51797 869 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 DCAF12L1Q5VU92 463 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 CPNE8Q86YQ8 564 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 SLC43A3Q8NBI5 491 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 GSTCDQ8NEC7 633 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 OR6B3Q8NGW1 331 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 ALG3Q92685 438 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 KRT35Q92764 455 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 CD101Q93033 1021 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 BEGAINQ9BUH8 593 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 SLC38A7Q9NVC3 462 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 GDAP2Q9NXN4 497 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLDN18-203ENST00000479660 GIT1Q9Y2X7 761 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 SQORQ9Y6N5 450 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 CCDC66A2RUB6 948 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 KBTBD13C9JR72 458 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 O00370 1275 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 SPTLC1O15269 473 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 THP07101 528 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 LRPAP1P30533 357 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 RAB27AP51159 221 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 LILRA4P59901 499 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 SV2CQ496J9 727 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 AGMOQ6ZNB7 445 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 MRPL10Q7Z7H8 261 aaKnown RBP15.29■□□□□ 0.04
CLDN18-203ENST00000479660 C12orf29Q8N999 325 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 FEZF2Q8TBJ5 459 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 ADAM2Q99965 735 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 TRAIPQ9BWF2 469 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 CYTH4Q9UIA0 394 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 RAB21Q9UL25 225 aa15.29■□□□□ 0.04
CLDN18-203ENST00000479660 A0A0U1RQF3 1178 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 ARL5CA6NH57 179 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 M0QYV0 167 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 ARVCFO00192 962 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 ZNF623O75123 536 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 TUBBP07437 444 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 IBSPP21815 317 aaPredicted RBP15.28■□□□□ 0.04
CLDN18-203ENST00000479660 SLC1A1P43005 524 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 MARCKSL1P49006 195 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 PEX5P50542 639 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 AFF1P51825 1210 aaKnown RBP15.28■□□□□ 0.04
CLDN18-203ENST00000479660 DSC3Q14574 896 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 PTPN20Q4JDL3 420 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 ACOT1Q86TX2 421 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 UNC93AQ86WB7 457 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 RNF169Q8NCN4 708 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 RNPC3Q96LT9 517 aaKnown RBP15.28■□□□□ 0.04
CLDN18-203ENST00000479660 UNC93B1Q9H1C4 597 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 MIOSQ9NXC5 875 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 TMEM59LQ9UK28 342 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 STRIP2Q9ULQ0 834 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 TTC7AQ9ULT0 858 aaPredicted RBP15.28■□□□□ 0.04
CLDN18-203ENST00000479660 PHF24Q9UPV7 400 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 PCDHA3Q9Y5H8 950 aa15.28■□□□□ 0.04
CLDN18-203ENST00000479660 TARSL2A2RTX5 802 aaKnown RBP15.27■□□□□ 0.04
CLDN18-203ENST00000479660 GJB6O95452 261 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 MYCP01106 439 aaPredicted RBP15.27■□□□□ 0.04
CLDN18-203ENST00000479660 FGGP02679 453 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 CTNNA1P35221 906 aaKnown RBP15.27■□□□□ 0.04
CLDN18-203ENST00000479660 GPD2P43304 727 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 RPL7AP62424 266 aaKnown RBP15.27■□□□□ 0.04
CLDN18-203ENST00000479660 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.04
CLDN18-203ENST00000479660 CYP4A22Q5TCH4 519 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 DNAJC24Q6P3W2 148 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 LCLAT1Q6UWP7 414 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 MTERF4Q7Z6M4 381 aaKnown RBP15.27■□□□□ 0.04
CLDN18-203ENST00000479660 APPL2Q8NEU8 664 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 UBA3Q8TBC4 463 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 C18orf8Q96DM3 657 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 LRRC1Q9BTT6 524 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 TSPYL2Q9H2G4 693 aaPredicted RBP15.27■□□□□ 0.04
CLDN18-203ENST00000479660 TSPAN16Q9UKR8 245 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 NME7Q9Y5B8 376 aa15.27■□□□□ 0.04
CLDN18-203ENST00000479660 TCRBV5S1A1TA0A578 114 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 CCDC151A5D8V7 595 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 A8MXQ7 604 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 HUS1O60921 280 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 PROSCO94903 275 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 CTNNA2P26232 953 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 GNL1P36915 607 aaPredicted RBP15.27■□□□□ 0.03
CLDN18-203ENST00000479660 BRD3Q15059 726 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 STILQ15468 1287 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 DCUN1D2Q6PH85 259 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 C3orf20Q8ND61 904 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 CPXM1Q96SM3 734 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 AP1M1Q9BXS5 423 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 SYNCQ9H7C4 482 aa15.27■□□□□ 0.03
CLDN18-203ENST00000479660 KRIT1O00522 736 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 SCNN1GP51170 649 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 VSNL1P62760 191 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 LONRF2Q1L5Z9 754 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 PPP1R26Q5T8A7 1209 aaPredicted RBP15.26■□□□□ 0.03
CLDN18-203ENST00000479660 C8orf74Q6P047 294 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 WDR93Q6P2C0 686 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 TMCO3Q6UWJ1 677 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.26■□□□□ 0.03
CLDN18-203ENST00000479660 KBTBD7Q8WVZ9 684 aa15.26■□□□□ 0.03
CLDN18-203ENST00000479660 MCEEQ96PE7 176 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms