RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 RHOBTB2Q9BYZ6 727 aa9.77□□□□□ -0.85
CMTM1-208ENST00000479381 ATXN3LQ9H3M9 355 aa9.77□□□□□ -0.85
CMTM1-208ENST00000479381 DDX43Q9NXZ2 648 aaKnown RBP9.77□□□□□ -0.85
CMTM1-208ENST00000479381 MAGED2Q9UNF1 606 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-208ENST00000479381 SCN1AP35498 2009 aa9.77□□□□□ -0.85
CMTM1-208ENST00000479381 SPTLC1O15269 473 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 N4BP1O75113 896 aaKnown RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 PRPF40AO75400 957 aaKnown RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 SOAT2O75908 522 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 ABLIM3O94929 683 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 OAZ2O95190 189 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 RPN1P04843 607 aaKnown RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 SRFP11831 508 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 GJA1P17302 382 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 ACAT1P24752 427 aaKnown RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 TUFMP49411 452 aaKnown RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 NDUFA8P51970 172 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 VCPP55072 806 aaKnown RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 PSMD2Q13200 908 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 GPR17Q13304 367 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 MRPL58Q14197 206 aaKnown RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 KNOP1Q1ED39 458 aaKnown RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 PARM1Q6UWI2 310 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 SPATA2LQ8IUW3 424 aaPredicted RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 WDR49Q8IV35 697 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 SCN4BQ8IWT1 228 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 NPAS3Q8IXF0 933 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 LRRC52Q8N7C0 313 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 C1orf127Q8N9H9 656 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 ATAD1Q8NBU5 361 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 LEMD2Q8NC56 503 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 ZNF507Q8TCN5 953 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 GPR152Q8TDT2 470 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 GIPC2Q8TF65 315 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 SCFD1Q8WVM8 642 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 HPDLQ96IR7 371 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 FAM84AQ96KN4 292 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 PRRX2Q99811 253 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 STRA6Q9BX79 667 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 SNX25Q9H3E2 840 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 MMRN2Q9H8L6 949 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 CGNQ9P2M7 1197 aaKnown RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 HOOK1Q9UJC3 728 aaKnown RBP9.76□□□□□ -0.85
CMTM1-208ENST00000479381 MAFFQ9ULX9 164 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 FRMD4BQ9Y2L6 1034 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 PCDHB5Q9Y5E4 795 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 DOCK6Q96HP0 2047 aa9.76□□□□□ -0.85
CMTM1-208ENST00000479381 TECTAO75443 2155 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 TSC2P49815 1807 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 ANO9A1A5B4 782 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 ACTN4O43707 911 aaKnown RBP9.75□□□□□ -0.85
CMTM1-208ENST00000479381 MYL1P05976 194 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 ADRB2P07550 413 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 POU2F2P09086 479 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 TRIM21P19474 475 aaKnown RBP9.75□□□□□ -0.85
CMTM1-208ENST00000479381 GABRR2P28476 465 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 PCSK1P29120 753 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 AVPR2P30518 371 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 PLA2G5P39877 138 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 AARSP49588 968 aaKnown RBP eCLIP9.75□□□□□ -0.85
CMTM1-208ENST00000479381 WNT7BP56706 349 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 SNRPFP62306 86 aaKnown RBP9.75□□□□□ -0.85
CMTM1-208ENST00000479381 PFKPQ01813 784 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 HTR4Q13639 388 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 GRM2Q14416 872 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 UBXN2BQ14CS0 331 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 TEAD2Q15562 447 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 NFE2Q16621 373 aaPredicted RBP9.75□□□□□ -0.85
CMTM1-208ENST00000479381 BMP8AQ7Z5Y6 402 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 TMEM86AQ8N2M4 240 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 SLC44A3Q8N4M1 653 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 OR6B3Q8NGW1 331 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 OR10T2Q8NGX3 314 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 SPPL2BQ8TCT7 592 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 ATOH1Q92858 354 aaPredicted RBP9.75□□□□□ -0.85
CMTM1-208ENST00000479381 FGF14Q92915 247 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 TCEAL4Q96EI5 215 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 ASIC4Q96FT7 647 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 ZFRQ96KR1 1074 aaKnown RBP9.75□□□□□ -0.85
CMTM1-208ENST00000479381 CGRRF1Q99675 332 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 LPIN3Q9BQK8 851 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 PI4K2AQ9BTU6 479 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 BRD9Q9H8M2 597 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 ZFP14Q9HCL3 533 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 ARHGEF3Q9NR81 526 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 INTS13Q9NVM9 706 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 NXF1Q9UBU9 619 aaKnown RBP9.75□□□□□ -0.85
CMTM1-208ENST00000479381 MAPK8IP1Q9UQF2 711 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 ZDHHC9Q9Y397 364 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 BDP1A6H8Y1 2624 aa9.75□□□□□ -0.85
CMTM1-208ENST00000479381 TBC1D4O60343 1298 aa9.74□□□□□ -0.85
CMTM1-208ENST00000479381 ZNF202O95125 648 aa9.74□□□□□ -0.85
CMTM1-208ENST00000479381 FGF19O95750 216 aa9.74□□□□□ -0.85
CMTM1-208ENST00000479381 CYP11A1P05108 521 aa9.74□□□□□ -0.85
CMTM1-208ENST00000479381 KRT13P13646 458 aa9.74□□□□□ -0.85
CMTM1-208ENST00000479381 ANXA13P27216 316 aa9.74□□□□□ -0.85
CMTM1-208ENST00000479381 ANP32AP39687 249 aaKnown RBP9.74□□□□□ -0.85
CMTM1-208ENST00000479381 LHX1P48742 406 aa9.74□□□□□ -0.85
CMTM1-208ENST00000479381 CYP27A1Q02318 531 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms