RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 ITGA7Q13683 1181 aa11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 FASTKD3Q14CZ7 662 aaKnown RBP11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 ATP13A4Q4VNC1 1196 aa11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 LIN52Q52LA3 116 aa11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 TMEM63BQ5T3F8 832 aa11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 ACAD10Q6JQN1 1059 aa11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 ENDOVQ8N8Q3 282 aaKnown RBP11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 HELQQ8TDG4 1101 aa11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 SMC6Q96SB8 1091 aa11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 STRA6Q9BX79 667 aa11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 RABL2BQ9UNT1 228 aa11.64□□□□□ -0.55
LRRFIP1-211ENST00000478958 WNK3Q9BYP7 1800 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 ADAMTSL1Q8N6G6 1762 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 COL24A1Q17RW2 1714 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 POLRMTO00411 1230 aaKnown RBP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 ZCCHC18P0CG32 403 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 PLS3P13797 630 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 ETS1P14921 441 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 ATF7P17544 494 aaPredicted RBP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 IL9RQ01113 521 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 SP4Q02446 784 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 MTFR1Q15390 333 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 ZNF568Q3ZCX4 644 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 SPATA24Q86W54 205 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 PDCD7Q8N8D1 485 aaKnown RBP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 C12orf50Q8NA57 414 aaPredicted RBP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 MORC4Q8TE76 937 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 GATA6Q92908 595 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 UTP4Q969X6 686 aaKnown RBP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 ACSF2Q96CM8 615 aaPredicted RBP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 MAGEB18Q96M61 343 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 DDX50Q9BQ39 737 aaKnown RBP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 CCDC77Q9BR77 488 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 VPS37BQ9H9H4 285 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 RAB20Q9NX57 234 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 TCEAL9Q9UHQ7 104 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 ITM2BQ9Y287 266 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 BOLA2-SMG1P6H3BVE0 249 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 SORBS3O60504 671 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 BANF1O75531 89 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 UNC5CO95185 931 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 IFNB1P01574 187 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 CFHP08603 1231 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 POTEJP0CG39 1038 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 KPNB1Q14974 876 aaKnown RBP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 UGCGQ16739 394 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 XKR9Q5GH70 373 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 FAM182AQ5T1J6 154 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 SV2AQ7L0J3 742 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 ANKS1BQ7Z6G8 1248 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 FBXL13Q8NEE6 735 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 LRRC8CQ8TDW0 803 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 CLIP3Q96DZ5 547 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 MPP4Q96JB8 637 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 FHDC1Q9C0D6 1143 aaPredicted RBP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 PRKAG3Q9UGI9 489 aa11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 SCAF8Q9UPN6 1271 aaKnown RBP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.63□□□□□ -0.55
LRRFIP1-211ENST00000478958 MROH7Q68CQ1 1323 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 FAM47DPA6NHR8 397 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 MTA2O94776 668 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 P4HBP07237 508 aaKnown RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 CA4P22748 312 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 NFKBIAP25963 317 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 YWHABP31946 246 aaKnown RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 MAGEA4P43358 317 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 NEK2P51955 445 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 TAS2R40P59535 323 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 PTK6Q13882 451 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 SPOPLQ6IQ16 392 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 LDHDQ86WU2 507 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 PRMT6Q96LA8 375 aaPredicted RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 ZMAT2Q96NC0 199 aaKnown RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 OLFM3Q96PB7 478 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 LRRC37BQ96QE4 947 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 GLIS2Q9BZE0 524 aaPredicted RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 KIAA1683Q9H0B3 1180 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 C12orf65Q9H3J6 166 aaKnown RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 KCND2Q9NZV8 630 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 PHTF1Q9UMS5 762 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 DENND3A2RUS2 1198 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 GRIN3BO60391 1043 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 MYCLP12524 364 aaPredicted RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 GM2AP17900 193 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 NSFP46459 744 aaKnown RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 TRPC1P48995 793 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 RTP1P59025 263 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 PLCB3Q01970 1234 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 SPP2Q13103 211 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 PKN2Q16513 984 aaKnown RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 CLEC16AQ2KHT3 1053 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 PARP6Q2NL67 630 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 ANKRD35Q8N283 1001 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 GRK7Q8WTQ7 553 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 SCG3Q8WXD2 468 aaKnown RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 DDX1Q92499 740 aaKnown RBP11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 ALG13Q9NP73 1137 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms