RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	TMEM199	Q8N511	208 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	PRELID2	Q8N945	189 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	CCDC26	Q8TAB7	109 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	DNAJB3	Q8WWF6	145 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	ELMO3	Q96BJ8	720 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	CYFIP2	Q96F07	1278 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	DDX27	Q96GQ7	796 aa	Known RBP	10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	RUNDC3B	Q96NL0	473 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	TCHP	Q9BT92	498 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	TXLNGY	Q9BZA5	131 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	FAM129A	Q9BZQ8	928 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	DDX47	Q9H0S4	455 aa	Known RBP	10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	ERVK-5	Q9HDB9	667 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	CISH	Q9NSE2	258 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	TBX21	Q9UL17	535 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	SCIN	Q9Y6U3	715 aa		10.16	□□□□□ -0.78
ATG7-223	ENST00000478638	GOLGA6L10	A0A0M3HER8	536 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	LACTBL1	A8MY62	500 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638		H0YGN5	161 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	PITPNM1	O00562	1244 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	ATMIN	O43313	823 aa	Predicted RBP	10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	PSTPIP1	O43586	416 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	CAND2	O75155	1236 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	GPR32	O75388	356 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	CALB1	P05937	261 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	CFH	P08603	1231 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	NFIC	P08651	508 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	STAG3L1	P0CL83	205 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	CXCL8	P10145	99 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	PYGM	P11217	842 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	HARS	P12081	509 aa	Known RBP	10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	CKB	P12277	381 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	SELP	P16109	830 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	FNTA	P49354	379 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	DNA2	P51530	1060 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	RWDD2B	P57060	319 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	GUCY2D	Q02846	1103 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	TAP1	Q03518	808 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	INCA1	Q0VD86	236 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	MESD	Q14696	234 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	ZBTB6	Q15916	424 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	ZNF699	Q32M78	642 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	XKR4	Q5GH76	650 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	ZNF618	Q5T7W0	954 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	EMC10	Q5UCC4	262 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	LRRC38	Q5VT99	294 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	GSPT2	Q8IYD1	628 aa	Known RBP	10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	THNSL1	Q8IYQ7	743 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	TTC39C	Q8N584	583 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	WDTC1	Q8N5D0	677 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	NIPA2	Q8N8Q9	360 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	TSEN2	Q8NCE0	465 aa	Known RBP	10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	BAD	Q92934	168 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	EXOC4	Q96A65	974 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	ZBTB10	Q96DT7	871 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	TSPAN18	Q96SJ8	248 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	LRRC19	Q9H756	370 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	PLEKHA5	Q9HAU0	1116 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	MRPL47	Q9HD33	250 aa	Known RBP	10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	FAM114A2	Q9NRY5	505 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	AKT3	Q9Y243	479 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	TRIP11	Q15643	1979 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	SCN10A	Q9Y5Y9	1956 aa		10.15	□□□□□ -0.78
ATG7-223	ENST00000478638	TMEM191C	A6NGB0	347 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	CILP	O75339	1184 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	PARN	O95453	639 aa	Known RBP	10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	CALCA	P01258	141 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	CTSH	P09668	335 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	FAM153B	P0C7A2	387 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	ITGB8	P26012	769 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	AXL	P30530	894 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	HOXA11	P31270	313 aa	Predicted RBP	10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	GBP1	P32455	592 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	PTPN7	P35236	360 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	TFAM	Q00059	246 aa	Known RBP	10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	DMTN	Q08495	405 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	KLF1	Q13351	362 aa	Predicted RBP	10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	PPIG	Q13427	754 aa	Known RBP eCLIP	10.14	□□□□□ -0.79	3e-6	■□□□□ 10.6
ATG7-223	ENST00000478638	TRPC3	Q13507	836 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	TRIM71	Q2Q1W2	868 aa	Known RBP	10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	FAM153C	Q494X1	144 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	SEL1L2	Q5TEA6	688 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	JADE1	Q6IE81	842 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	MFSD5	Q6N075	450 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	LRRC8D	Q7L1W4	858 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	RPAIN	Q86UA6	219 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	CPNE8	Q86YQ8	564 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	KLHL7	Q8IXQ5	586 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	KATNAL2	Q8IYT4	538 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	TMEM35B	Q8NCS4	154 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	FNIP1	Q8TF40	1166 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	PIK3R5	Q8WYR1	880 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	TFAP2B	Q92481	460 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	SCLT1	Q96NL6	688 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	AP1M1	Q9BXS5	423 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	RAB17	Q9H0T7	212 aa		10.14	□□□□□ -0.79
ATG7-223	ENST00000478638	ZDHHC18	Q9NUE0	388 aa		10.14	□□□□□ -0.79

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