RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 FANCBQ8NB91 859 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 JADE3Q92613 823 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 FAM136AQ96C01 138 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 CLPTM1LQ96KA5 538 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 CAMKK2Q96RR4 588 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 ADGRE3Q9BY15 652 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 PRSS22Q9GZN4 317 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 CALCOCO1Q9P1Z2 691 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 LIMCH1Q9UPQ0 1083 aa4.37□□□□□ -1.71
HPS3-205ENST00000478525 SMIM35A0A1B0GVV1 85 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 KCNU1A8MYU2 1149 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 ADAMTS3O15072 1205 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 FAM163BP0C2L3 166 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 CPEP16870 476 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 ITGALP20701 1170 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 CD6P30203 668 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 NR4A2P43354 598 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 MASP1P48740 699 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 ZNF135P52742 658 aaPredicted RBP4.36□□□□□ -1.71
HPS3-205ENST00000478525 SLC16A1P53985 500 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 ZNF260Q3ZCT1 412 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 AARS2Q5JTZ9 985 aaKnown RBP4.36□□□□□ -1.71
HPS3-205ENST00000478525 TEDDM1Q5T9Z0 273 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 ANKRD16Q6P6B7 361 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 ZNF804AQ7Z570 1209 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 NPM2Q86SE8 214 aaKnown RBP4.36□□□□□ -1.71
HPS3-205ENST00000478525 CNPPD1Q9BV87 410 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 TUBA8Q9NY65 449 aaPredicted RBP4.36□□□□□ -1.71
HPS3-205ENST00000478525 CNTNAP2Q9UHC6 1331 aa4.36□□□□□ -1.71
HPS3-205ENST00000478525 CCDC154A6NI56 674 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 NT5C1B-RDH14C9J2C7 533 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 PPM1DO15297 605 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 SOAT2O75908 522 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 DNAJB5O75953 348 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 GJB1P08034 283 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 CBSLP0DN79 551 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 CBSP35520 551 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 TOB1P50616 345 aaPredicted RBP4.35□□□□□ -1.71
HPS3-205ENST00000478525 POLGP54098 1239 aaPredicted RBP4.35□□□□□ -1.71
HPS3-205ENST00000478525 RAPGEF1Q13905 1077 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 RABEP1Q15276 862 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 ZNF618Q5T7W0 954 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 CATSPERGQ6ZRH7 1159 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 GALNT16Q8N428 558 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 SLKQ9H2G2 1235 aaPredicted RBP4.35□□□□□ -1.71
HPS3-205ENST00000478525 BRD9Q9H8M2 597 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 PDGFCQ9NRA1 345 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 RLIMQ9NVW2 624 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 MTMR4Q9NYA4 1195 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 DLL3Q9NYJ7 618 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 AGAP1Q9UPQ3 857 aa4.35□□□□□ -1.71
HPS3-205ENST00000478525 INSIG1O15503 277 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 VPS4BO75351 444 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 CHEK2O96017 543 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 MALP21145 153 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 TKTP29401 623 aaKnown RBP4.34□□□□□ -1.71
HPS3-205ENST00000478525 IARSP41252 1262 aaKnown RBP4.34□□□□□ -1.71
HPS3-205ENST00000478525 CLCN2P51788 898 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 EEFSECP57772 596 aaKnown RBP4.34□□□□□ -1.71
HPS3-205ENST00000478525 CYP4F2P78329 520 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 LAMB3Q13751 1172 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 HABP2Q14520 560 aaPredicted RBP4.34□□□□□ -1.71
HPS3-205ENST00000478525 RNF219Q5W0B1 726 aaPredicted RBP4.34□□□□□ -1.71
HPS3-205ENST00000478525 SLC4A10Q6U841 1118 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 MAVSQ7Z434 540 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 CHSY1Q86X52 802 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 KRT73Q86Y46 540 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 CNGA4Q8IV77 575 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 NSUN6Q8TEA1 469 aaKnown RBP4.34□□□□□ -1.71
HPS3-205ENST00000478525 HMCESQ96FZ2 354 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 VRK1Q99986 396 aaPredicted RBP4.34□□□□□ -1.71
HPS3-205ENST00000478525 MACROD1Q9BQ69 325 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 FAM126AQ9BYI3 521 aaPredicted RBP4.34□□□□□ -1.71
HPS3-205ENST00000478525 GPR35Q9HC97 309 aa4.34□□□□□ -1.71
HPS3-205ENST00000478525 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 PRSS29PA6NIE9 313 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 QSOX1O00391 747 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 KIF20AO95235 890 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 GNAI3P08754 354 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 CYP2C18P33260 490 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 LIPAP38571 399 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 ALDH9A1P49189 494 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 GNAI1P63096 354 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 SNAPC2Q13487 334 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 ACAP2Q15057 778 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 INAVAQ3KP66 663 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 Q4G0T1 1027 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 PPP4R3AQ6IN85 833 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 PPP1R32Q7Z5V6 425 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 SAMD14Q8IZD0 417 aaPredicted RBP4.33□□□□□ -1.72
HPS3-205ENST00000478525 PNLDC1Q8NA58 520 aaKnown RBP4.33□□□□□ -1.72
HPS3-205ENST00000478525 C1orf162Q8NEQ5 155 aaPredicted RBP4.33□□□□□ -1.72
HPS3-205ENST00000478525 C5orf34Q96MH7 638 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 SLAMF7Q9NQ25 335 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 SIDT1Q9NXL6 827 aaKnown RBP4.33□□□□□ -1.72
HPS3-205ENST00000478525 CFAP97Q9P2B7 532 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 LRP12Q9Y561 859 aa4.33□□□□□ -1.72
HPS3-205ENST00000478525 CYP2D7A0A087X1C5 515 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 IL6RP08887 468 aaPredicted RBP4.32□□□□□ -1.72
HPS3-205ENST00000478525 SNHG28P0DPA3 235 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms