RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
PCCB-214ENST00000478469 SYT15Q9BQS2 421 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 FTHL17Q9BXU8 183 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 KLHL11Q9NVR0 708 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 C2CD2Q9Y426 696 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 URODP06132 367 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 NCAM1P13591 858 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 RRM1P23921 792 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 SERPINB6P35237 376 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 MAP2K2P36507 400 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 CCDC137Q6PK04 289 aaKnown RBP12.66□□□□□ -0.38
PCCB-214ENST00000478469 REXO1L1PQ8IX06 675 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 WHAMMQ8TF30 809 aa12.66□□□□□ -0.38
PCCB-214ENST00000478469 WRAP73Q9P2S5 460 aaPredicted RBP12.66□□□□□ -0.38
PCCB-214ENST00000478469 IPO11Q9UI26 975 aaKnown RBP12.66□□□□□ -0.38
PCCB-214ENST00000478469 TNRC6CQ9HCJ0 1690 aaKnown RBP12.66□□□□□ -0.38
PCCB-214ENST00000478469 PFDN6O15212 129 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 VIMP08670 466 aaKnown RBP12.65□□□□□ -0.38
PCCB-214ENST00000478469 TPI1P60174 286 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
PCCB-214ENST00000478469 IRF2BP1Q8IU81 584 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 SLC7A14Q8TBB6 771 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 C1orf54Q8WWF1 131 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 SPON2Q9BUD6 331 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 BCAS3Q9H6U6 928 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 HPCAL4Q9UM19 191 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 NFU1Q9UMS0 254 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 NAV1Q8NEY1 1877 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 LRP5O75197 1615 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 POC1B-GALNT4F8VUJ3 575 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 BNIP3LO60238 219 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 EFCAB13Q8IY85 973 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 OR5B17Q8NGF7 314 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 TPCN2Q8NHX9 752 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 GSDMBQ8TAX9 411 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 KAT5Q92993 513 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 FAF2Q96CS3 445 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 TRIM7Q9C029 511 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 CCDC68Q9H2F9 335 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 GRM5P41594 1212 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 STKLD1Q8NE28 680 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 NTPCRQ9BSD7 190 aaKnown RBP12.65□□□□□ -0.38
PCCB-214ENST00000478469 PACSIN1Q9BY11 444 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 FAM105AQ9NUU6 356 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 DUSP10Q9Y6W6 482 aa12.65□□□□□ -0.38
PCCB-214ENST00000478469 A6NNZ2 444 aa12.65□□□□□ -0.39
PCCB-214ENST00000478469 INHBAP08476 426 aa12.65□□□□□ -0.39
PCCB-214ENST00000478469 EPHB1P54762 984 aa12.65□□□□□ -0.39
PCCB-214ENST00000478469 TUBB8Q3ZCM7 444 aa12.65□□□□□ -0.39
PCCB-214ENST00000478469 CENPUQ71F23 418 aa12.65□□□□□ -0.39
PCCB-214ENST00000478469 ANKS4BQ8N8V4 417 aa12.65□□□□□ -0.39
PCCB-214ENST00000478469 OSBPL8Q9BZF1 889 aa12.65□□□□□ -0.39
PCCB-214ENST00000478469 ZMYM2Q9UBW7 1377 aa12.65□□□□□ -0.39
PCCB-214ENST00000478469 ZNF185O15231 689 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 ACAT1P24752 427 aaKnown RBP12.64□□□□□ -0.39
PCCB-214ENST00000478469 PPARDQ03181 441 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 BOLA3Q53S33 107 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 EMBQ6PCB8 327 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 ZC3H18Q86VM9 953 aaKnown RBP12.64□□□□□ -0.39
PCCB-214ENST00000478469 ZBTB10Q96DT7 871 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 SENP8Q96LD8 212 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 TSPAN16Q9UKR8 245 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 FRMD3A2A2Y4 597 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 SETSIPP0DME0 302 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 MARSP56192 900 aaKnown RBP12.64□□□□□ -0.39
PCCB-214ENST00000478469 KCNMA1Q12791 1236 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
PCCB-214ENST00000478469 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 C1orf228Q6PIY5 440 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 MFSD14AQ96MC6 490 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.64□□□□□ -0.39
PCCB-214ENST00000478469 TTC7AQ9ULT0 858 aaPredicted RBP12.64□□□□□ -0.39
PCCB-214ENST00000478469 PCDHB12Q9Y5F1 795 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 APOL1O14791 398 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 HMBSP08397 361 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 PAEPP09466 180 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 RPL10AP62906 217 aaKnown RBP12.64□□□□□ -0.39
PCCB-214ENST00000478469 BST2Q10589 180 aaKnown RBP12.64□□□□□ -0.39
PCCB-214ENST00000478469 DRP2Q13474 957 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 FAM171A1Q5VUB5 890 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 TDRD10Q5VZ19 366 aaKnown RBP12.64□□□□□ -0.39
PCCB-214ENST00000478469 TMC7Q7Z402 723 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 CHST12Q9NRB3 414 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 AMACRQ9UHK6 382 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 ADAMTS5Q9UNA0 930 aa12.64□□□□□ -0.39
PCCB-214ENST00000478469 MOXD2PA6NHM9 499 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 AMHP03971 560 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 NFIL3Q16649 462 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 OLFML2BQ68BL8 750 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 PHLDB3Q6NSJ2 640 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 CDKL3Q8IVW4 592 aaPredicted RBP12.63□□□□□ -0.39
PCCB-214ENST00000478469 PYROXD1Q8WU10 500 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 KRT82Q9NSB4 513 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 DNAJC17Q9NVM6 304 aaKnown RBP12.63□□□□□ -0.39
PCCB-214ENST00000478469 FAM187AA6NFU0 413 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 OAS2P29728 719 aaKnown RBP12.63□□□□□ -0.39
PCCB-214ENST00000478469 ARHGAP25P42331 645 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 ROR1Q01973 937 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 CLEC16AQ2KHT3 1053 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms