RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TMEM209Q96SK2 561 aa14.03□□□□□ -0.16
ABCF3-212ENST00000478288 SEPT5Q99719 369 aaPredicted RBP14.03□□□□□ -0.16
ABCF3-212ENST00000478288 IL21Q9HBE4 155 aa14.03□□□□□ -0.16
ABCF3-212ENST00000478288 DPP3Q9NY33 737 aa14.03□□□□□ -0.16
ABCF3-212ENST00000478288 MORC2Q9Y6X9 1032 aaPredicted RBP14.03□□□□□ -0.16
ABCF3-212ENST00000478288 GREB1Q4ZG55 1949 aa14.02□□□□□ -0.16
ABCF3-212ENST00000478288 SLC38A8A6NNN8 435 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 CYB561D2O14569 222 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 PRAMEF12O95522 483 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 GAP43P17677 238 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 PDCP20941 246 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 DDX6P26196 483 aaKnown RBP eCLIP14.02□□□□□ -0.17
ABCF3-212ENST00000478288 ADSSP30520 456 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 SATB1Q01826 763 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 CCINQ13939 588 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 MGAT5BQ3V5L5 792 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 SV2CQ496J9 727 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 ZC2HC1CQ53FD0 456 aaPredicted RBP14.02□□□□□ -0.17
ABCF3-212ENST00000478288 CRELD2Q6UXH1 353 aaPredicted RBP14.02□□□□□ -0.17
ABCF3-212ENST00000478288 SPATA18Q8TC71 538 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 BPIFB1Q8TDL5 484 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 LEO1Q8WVC0 666 aaPredicted RBP14.02□□□□□ -0.17
ABCF3-212ENST00000478288 POMGNT1Q8WZA1 660 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 ZNF560Q96MR9 790 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 LPIN3Q9BQK8 851 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 PYM1Q9BRP8 204 aaKnown RBP14.02□□□□□ -0.17
ABCF3-212ENST00000478288 OLFML3Q9NRN5 406 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 CCDC39Q9UFE4 941 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 EXOC7Q9UPT5 735 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 MAP1BP46821 2468 aaKnown RBP14.02□□□□□ -0.17
ABCF3-212ENST00000478288 ATG2BQ96BY7 2078 aa14.02□□□□□ -0.17
ABCF3-212ENST00000478288 KMT2BQ9UMN6 2715 aaPredicted RBP14.01□□□□□ -0.17
ABCF3-212ENST00000478288 KPNA7A9QM74 516 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 TISP43B9A030 160 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 K7ESF4 209 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 FOXD2O60548 495 aaPredicted RBP14.01□□□□□ -0.17
ABCF3-212ENST00000478288 SOAT2O75908 522 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 RETP07949 1114 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 HAPLN1P10915 354 aaPredicted RBP14.01□□□□□ -0.17
ABCF3-212ENST00000478288 CUL4AQ13619 759 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 ALCAMQ13740 583 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 PTPAQ15257 358 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 NFE2Q16621 373 aaPredicted RBP14.01□□□□□ -0.17
ABCF3-212ENST00000478288 WSCD1Q658N2 575 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 TXNDC11Q6PKC3 985 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 LONP2Q86WA8 852 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 SFR1Q86XK3 245 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 BRSK2Q8IWQ3 736 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 EFCAB13Q8IY85 973 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 DCP1BQ8IZD4 617 aaKnown RBP14.01□□□□□ -0.17
ABCF3-212ENST00000478288 FAM200AQ8TCP9 573 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 ABCB6Q9NP58 842 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 THG1LQ9NWX6 298 aaKnown RBP14.01□□□□□ -0.17
ABCF3-212ENST00000478288 CDV3Q9UKY7 258 aaKnown RBP14.01□□□□□ -0.17
ABCF3-212ENST00000478288 SRPRBQ9Y5M8 271 aaKnown RBP14.01□□□□□ -0.17
ABCF3-212ENST00000478288 ANAPC1Q9H1A4 1944 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 CEP295Q9C0D2 2601 aa14.01□□□□□ -0.17
ABCF3-212ENST00000478288 GARTP22102 1010 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 TXLNAP40222 546 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 SOX9P48436 509 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 TSPY1Q01534 308 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 ITPRIPL2Q3MIP1 535 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 WDR44Q5JSH3 913 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 L1TD1Q5T7N2 865 aaKnown RBP14□□□□□ -0.17
ABCF3-212ENST00000478288 LRRTM3Q86VH5 581 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 CMTM8Q8IZV2 173 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 LRRC52Q8N7C0 313 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 DNAJC19Q96DA6 116 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 EPSTI1Q96J88 318 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 RTKNQ9BST9 563 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 MRPL44Q9H9J2 332 aaKnown RBP14□□□□□ -0.17
ABCF3-212ENST00000478288 KIF9Q9HAQ2 790 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 PARD6AQ9NPB6 346 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 GTSE1Q9NYZ3 720 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 FBXO2Q9UK22 296 aaPredicted RBP14□□□□□ -0.17
ABCF3-212ENST00000478288 USP18Q9UMW8 372 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 PCDHB5Q9Y5E4 795 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 PTPRDP23468 1912 aa14□□□□□ -0.17
ABCF3-212ENST00000478288 CCDC163A0A0D9SF12 145 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 FRMD3A2A2Y4 597 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 MYMKA6NI61 221 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 LDHAP00338 332 aaKnown RBP13.99□□□□□ -0.17
ABCF3-212ENST00000478288 HMGA1P17096 107 aaKnown RBP13.99□□□□□ -0.17
ABCF3-212ENST00000478288 AVPR1AP37288 418 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 ATXN1P54253 815 aaKnown RBP13.99□□□□□ -0.17
ABCF3-212ENST00000478288 NLRP12P59046 1061 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 CYP4F8P98187 520 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 ZNF268Q14587 947 aaPredicted RBP13.99□□□□□ -0.17
ABCF3-212ENST00000478288 TAF12Q16514 161 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 RRAGBQ5VZM2 374 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 CCDC73Q6ZRK6 1079 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 Q6ZS52 159 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 USP49Q70CQ1 688 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 SV2BQ7L1I2 683 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 TMEM150AQ86TG1 271 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 TMEM86AQ8N2M4 240 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 TRMT2BQ96GJ1 504 aaKnown RBP13.99□□□□□ -0.17
ABCF3-212ENST00000478288 ZFYVE19Q96K21 471 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 ACCSQ96QU6 501 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 FAM83CQ9BQN1 747 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms