RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 SEC13P55735 322 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 NLRP5P59047 1200 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 FAM187BQ17R55 369 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 DUOXA1Q1HG43 343 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 TOGARAM2Q6ZUX3 1019 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 MAEAQ7L5Y9 396 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 APPL2Q8NEU8 664 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 BEST2Q8NFU1 509 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 CEP76Q8TAP6 659 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 DDX12PQ92771 950 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 CD101Q93033 1021 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 PSMG2Q969U7 264 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 SPACA7Q96KW9 195 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 CCDC43Q96MW1 224 aaKnown RBP10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 LLPHQ9BRT6 129 aaKnown RBP10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 POLMQ9NP87 494 aaPredicted RBP10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 DACH1Q9UI36 760 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 TBX20Q9UMR3 447 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 APOBEC2Q9Y235 224 aaKnown RBP10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 CCL26Q9Y258 94 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 SLC27A5Q9Y2P5 690 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 ASB3Q9Y575 518 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 STK24Q9Y6E0 443 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 PIEZO2Q9H5I5 2752 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 MARCH6O60337 910 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 SOAT2O75908 522 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 SERPINF2P08697 491 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 MCM4P33991 863 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 P2RY2P41231 377 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 HMGN5P82970 282 aaKnown RBP10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 DCAF4L1Q3SXM0 396 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 C2orf27AQ580R0 203 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 PEAR1Q5VY43 1037 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 LMBRD2Q68DH5 695 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 CDCA2Q69YH5 1023 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 CC2D1AQ6P1N0 951 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 MOXD1Q6UVY6 613 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 SLCO6A1Q86UG4 719 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 NAXDQ8IW45 347 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 NSUN7Q8NE18 718 aaKnown RBP10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 OLIG1Q8TAK6 271 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 SUSD3Q96L08 255 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 FAM20AQ96MK3 541 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 GCNAQ96QF7 691 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 SLC46A2Q9BY10 475 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 CLMPQ9H6B4 373 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 GPRC5CQ9NQ84 441 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 DNAAF2Q9NVR5 837 aaKnown RBP10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 KIF3AQ9Y496 699 aa10.59□□□□□ -0.71
SMARCB1-206ENST00000477836 PTPRDP23468 1912 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 MGAQ8IWI9 3026 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 PCDH15Q96QU1 1955 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 TRABD2BA6NFA1 517 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 CAPN9O14815 690 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 JAK2O60674 1132 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 USO1O60763 962 aaKnown RBP10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 ALDH1A2O94788 518 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 SLITRK3O94933 977 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 EDN1P05305 212 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 GJB2P29033 226 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 MARCKSP29966 332 aaPredicted RBP10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 HOXD12P35452 270 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 DDIT3P35638 169 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 AVPR1AP37288 418 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 BFSP1Q12934 665 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 SLC14A1Q13336 389 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 ITIH5Q86UX2 942 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 MARCH9Q86YJ5 346 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 CMTM8Q8IZV2 173 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 CCDC33Q8N5R6 958 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 DEFB119Q8N690 84 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 FAM184AQ8NB25 1140 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 LSM14AQ8ND56 463 aaKnown RBP10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 CCDC26Q8TAB7 109 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 SLC26A6Q9BXS9 759 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 C2orf40Q9H1Z8 148 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 CAPN10Q9HC96 672 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 KCNMB3Q9NPA1 279 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 SLC38A7Q9NVC3 462 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 CHMP5Q9NZZ3 219 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 PCDHA4Q9UN74 947 aa10.58□□□□□ -0.72
SMARCB1-206ENST00000477836 GON4LQ3T8J9 2241 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 A0A087WWV3 80 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 ANTXRLA6NF34 631 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 ACKR2O00590 384 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 SYPP08247 313 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 PDCP20941 246 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 ITPKBP27987 946 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 CDC25CP30307 473 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 RARRES1P49788 294 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 YARSP54577 528 aaKnown RBP10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 OSTNP61366 133 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 CFHR1Q03591 330 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 YWHAHQ04917 246 aaPredicted RBP10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 NBR1Q14596 966 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 PDGFRLQ15198 375 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 CRY1Q16526 586 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 INF2Q27J81 1249 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 SPDYCQ5MJ68 293 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms