RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 FAM118BQ9BPY3 351 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 TARS2Q9BW92 718 aaKnown RBP19.08■□□□□ 0.64
CCM2-209ENST00000477605 TRABDQ9H4I3 376 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 IVNS1ABPQ9Y6Y0 642 aa19.08■□□□□ 0.64
CCM2-209ENST00000477605 C19orf81C9J6K1 198 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 SMAPO00193 183 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 PECAM1P16284 738 aaPredicted RBP19.07■□□□□ 0.64
CCM2-209ENST00000477605 ATP4AP20648 1035 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 RPS12P25398 132 aaKnown RBP19.07■□□□□ 0.64
CCM2-209ENST00000477605 YARSP54577 528 aaKnown RBP19.07■□□□□ 0.64
CCM2-209ENST00000477605 RPL7AP62424 266 aaKnown RBP19.07■□□□□ 0.64
CCM2-209ENST00000477605 GPS1Q13098 491 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 SETDB1Q15047 1291 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 ZKSCAN8Q15776 578 aaPredicted RBP19.07■□□□□ 0.64
CCM2-209ENST00000477605 PPP1R15BQ5SWA1 713 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 TLDC1Q6P9B6 456 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 OR5B17Q8NGF7 314 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 WNK4Q96J92 1243 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 ZBTB45Q96K62 511 aaPredicted RBP19.07■□□□□ 0.64
CCM2-209ENST00000477605 RAB3IPQ96QF0 476 aaPredicted RBP19.07■□□□□ 0.64
CCM2-209ENST00000477605 TEX13BQ9BXU2 312 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 FBXO40Q9UH90 709 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 PCDHGC3Q9UN70 934 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.07■□□□□ 0.64
CCM2-209ENST00000477605 PPME1Q9Y570 386 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 USH1CQ9Y6N9 552 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 FOXO6A8MYZ6 492 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 PI4K2BG5E9Z4 385 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 WFS1O76024 890 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 UNC5CO95185 931 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 KRT10P13645 584 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 ATF7P17544 494 aaPredicted RBP19.07■□□□□ 0.64
CCM2-209ENST00000477605 E2F5Q15329 346 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 PDK4Q16654 411 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 DCUN1D2Q6PH85 259 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 ECHDC2Q86YB7 292 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 TTC13Q8NBP0 860 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 RMDN2Q96LZ7 410 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 ZNF112Q9UJU3 913 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 STRIP2Q9ULQ0 834 aa19.07■□□□□ 0.64
CCM2-209ENST00000477605 IGKV6D-21A0A0A0MT36 114 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 GLTPD2A6NH11 291 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 ADCY3O60266 1144 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 ALDH3A1P30838 453 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 CDKN2BP42772 138 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 EFNA5P52803 228 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 SP4Q02446 784 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 ZNF252P-AS1Q0IIN9 211 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 STXBP2Q15833 593 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 ATP13A4Q4VNC1 1196 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 ZFYVE27Q5T4F4 411 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 KAZNQ674X7 775 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 L3MBTL3Q96JM7 780 aaPredicted RBP19.06■□□□□ 0.64
CCM2-209ENST00000477605 NRBP2Q9NSY0 501 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 TELO2Q9Y4R8 837 aa19.06■□□□□ 0.64
CCM2-209ENST00000477605 TSHRP16473 764 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 PHBP35232 272 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 MSH2P43246 934 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 LACTBP83111 547 aaPredicted RBP19.05■□□□□ 0.64
CCM2-209ENST00000477605 MGAT5Q09328 741 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 SGSM1Q2NKQ1 1148 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 PARP6Q2NL67 630 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 GPATCH11Q8N954 259 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 DNERQ8NFT8 737 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 SLC35B2Q8TB61 432 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 NIF3L1Q9GZT8 377 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 NOP53Q9NZM5 478 aaKnown RBP19.05■□□□□ 0.64
CCM2-209ENST00000477605 ANKFY1Q9P2R3 1169 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 PSMC3IPQ9P2W1 217 aaPredicted RBP19.05■□□□□ 0.64
CCM2-209ENST00000477605 GGT7Q9UJ14 662 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 CEP83Q9Y592 693 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 DCTN3O75935 186 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 KRT15P19012 456 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 TMEM132BQ14DG7 1078 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 EFHC2Q5JST6 749 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 ZBTB41Q5SVQ8 909 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 MCEEQ96PE7 176 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 VPS37BQ9H9H4 285 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 PNMA3Q9UL41 463 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 PHTF1Q9UMS5 762 aa19.05■□□□□ 0.64
CCM2-209ENST00000477605 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.05■□□□□ 0.64
CCM2-209ENST00000477605 F8VP50 259 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 YWHAEP62258 255 aaKnown RBP19.04■□□□□ 0.64
CCM2-209ENST00000477605 TARBP2Q15633 366 aaKnown RBP19.04■□□□□ 0.64
CCM2-209ENST00000477605 PRUNE1Q86TP1 453 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 ERICH1Q86X53 443 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 GLIS1Q8NBF1 620 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 PRCCQ92733 491 aaPredicted RBP19.04■□□□□ 0.64
CCM2-209ENST00000477605 RRAGCQ9HB90 399 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 PICK1Q9NRD5 415 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 POC1B-GALNT4F8VUJ3 575 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 EDF1O60869 148 aaKnown RBP19.04■□□□□ 0.64
CCM2-209ENST00000477605 ZWINTO95229 277 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 KRT7P08729 469 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 KRT16P08779 473 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 ZSCAN5DPP0CG00 497 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 PTPRAP18433 802 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 POLR2BP30876 1174 aaKnown RBP19.04■□□□□ 0.64
CCM2-209ENST00000477605 ATP11AP98196 1134 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 MOGSQ13724 837 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms