RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 TIMM13Q9Y5L4 95 aaPredicted RBP18.02■□□□□ 0.48
EPHB4-204ENST00000477446 MRFAP1Q9Y605 127 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 TSC2P49815 1807 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 TRANK1O15050 2925 aa18.02■□□□□ 0.47
EPHB4-204ENST00000477446 ATG2AQ2TAZ0 1938 aa18.02■□□□□ 0.47
EPHB4-204ENST00000477446 CTAGE9A4FU28 777 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 SYN3O14994 580 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 KRT86O43790 486 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 CSPG5O95196 566 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 ODC1P11926 461 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 ARHGAP25P42331 645 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 KLK7P49862 253 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 TNNC1P63316 161 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 SPA17Q15506 151 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 WDR44Q5JSH3 913 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 GPR153Q6NV75 609 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 CACNA2D4Q7Z3S7 1137 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 TATDN2Q93075 761 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 MMS19Q96T76 1030 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 TCF25Q9BQ70 676 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 INTS2Q9H0H0 1204 aaKnown RBP18.01■□□□□ 0.47
EPHB4-204ENST00000477446 L1RE1Q9UN81 338 aa18.01■□□□□ 0.47
EPHB4-204ENST00000477446 HUS1O60921 280 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 CTSAP10619 480 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 SLC9A1P19634 815 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 IRS1P35568 1242 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 GLUD2P49448 558 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 DSG1Q02413 1049 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 KCNMA1Q12791 1236 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 EXOC3L4Q17RC7 722 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 SOWAHAQ2M3V2 549 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 KIAA0319Q5VV43 1072 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 WSCD1Q658N2 575 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 KIAA1841Q6NSI8 718 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 TMC7Q7Z402 723 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 LIMS2Q7Z4I7 341 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 TOP6BLQ8N6T0 577 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 APPL2Q8NEU8 664 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 AUTS2Q8WXX7 1259 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 UBXN4Q92575 508 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 LMAN2LQ9H0V9 348 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 SZT2Q5T011 3432 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 SSU72P8A0A1W2PR75 194 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 ARHGEF37A1IGU5 675 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 C2CD2LO14523 706 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 LCA5LO95447 670 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 CYP11A1P05108 521 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 URODP06132 367 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 TYMPP19971 482 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 PON1P27169 355 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 ASPAP45381 313 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 VARS2Q5ST30 1063 aaKnown RBP18■□□□□ 0.47
EPHB4-204ENST00000477446 SCARA5Q6ZMJ2 495 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 DPH6Q7L8W6 267 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 KIAA1328Q86T90 577 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 CEP112Q8N8E3 955 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 RIN2Q8WYP3 895 aaPredicted RBP18■□□□□ 0.47
EPHB4-204ENST00000477446 NAPGQ99747 312 aaPredicted RBP18■□□□□ 0.47
EPHB4-204ENST00000477446 NIF3L1Q9GZT8 377 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 ENTPD7Q9NQZ7 604 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 FAM207AQ9NSI2 230 aaPredicted RBP18■□□□□ 0.47
EPHB4-204ENST00000477446 REXO2Q9Y3B8 237 aaKnown RBP18■□□□□ 0.47
EPHB4-204ENST00000477446 PCDHGC5Q9Y5F6 944 aa18■□□□□ 0.47
EPHB4-204ENST00000477446 FSCN2O14926 492 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 FANCGO15287 622 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 CXCL14O95715 111 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 P4HA1P13674 534 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 YWHAHQ04917 246 aaPredicted RBP17.99■□□□□ 0.47
EPHB4-204ENST00000477446 MAPK8IP2Q13387 824 aaPredicted RBP17.99■□□□□ 0.47
EPHB4-204ENST00000477446 MRPL58Q14197 206 aaKnown RBP17.99■□□□□ 0.47
EPHB4-204ENST00000477446 PDXDC1Q6P996 788 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 PRSS55Q6UWB4 352 aaPredicted RBP17.99■□□□□ 0.47
EPHB4-204ENST00000477446 Q7L0L9 218 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 LNX1Q8TBB1 728 aaPredicted RBP17.99■□□□□ 0.47
EPHB4-204ENST00000477446 MICAL1Q8TDZ2 1067 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 PIK3R5Q8WYR1 880 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 BAP1Q92560 729 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 NT5C1BQ96P26 610 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 SMYD3Q9H7B4 428 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 PLCB1Q9NQ66 1216 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 MRPL17Q9NRX2 175 aaKnown RBP17.99■□□□□ 0.47
EPHB4-204ENST00000477446 CDC23Q9UJX2 597 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 DSEQ9UL01 958 aa17.99■□□□□ 0.47
EPHB4-204ENST00000477446 LILRB3O75022 631 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 OAZ2O95190 189 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 RAP1GAPP47736 663 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 CDH8P55286 799 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 APBA1Q02410 837 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 SMC1AQ14683 1233 aaKnown RBP17.98■□□□□ 0.47
EPHB4-204ENST00000477446 BMS1Q14692 1282 aaKnown RBP17.98■□□□□ 0.47
EPHB4-204ENST00000477446 PLPP4Q5VZY2 271 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 OVOS1Q6IE37 1185 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 PDE12Q6L8Q7 609 aaKnown RBP17.98■□□□□ 0.47
EPHB4-204ENST00000477446 PHLDB3Q6NSJ2 640 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 ANKS3Q6ZW76 656 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 RRAGAQ7L523 313 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 METTL23Q86XA0 190 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 ADGRF2Q8IZF7 708 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 TMEM86AQ8N2M4 240 aa17.98■□□□□ 0.47
EPHB4-204ENST00000477446 MRPL43Q8N983 215 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms