RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PEX19P40855 299 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 TDRD10Q5VZ19 366 aaKnown RBP11.58□□□□□ -0.56
COL27A1-204ENST00000477421 PDZD4Q76G19 769 aaPredicted RBP11.58□□□□□ -0.56
COL27A1-204ENST00000477421 TRPM8Q7Z2W7 1104 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 PID1Q7Z2X4 250 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 ZNF677Q86XU0 584 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 ANKRD13AQ8IZ07 590 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 LRRN4Q8WUT4 740 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 NT5C1AQ9BXI3 368 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 TRPM3Q9HCF6 1732 aaPredicted RBP11.58□□□□□ -0.56
COL27A1-204ENST00000477421 TAF1P21675 1872 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 CHUKO15111 745 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 RIPK2O43353 540 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 STAG3L1P0CL83 205 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 KRT4P19013 534 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 CYP2B6P20813 491 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 GCNT1Q02742 428 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 CACNB2Q08289 660 aaPredicted RBP11.58□□□□□ -0.56
COL27A1-204ENST00000477421 VGLL4Q14135 290 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 SEPT6Q14141 434 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 TSNAXIP1Q2TAA8 658 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 METTL7BQ6UX53 244 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 FASTKD5Q7L8L6 764 aaKnown RBP11.58□□□□□ -0.56
COL27A1-204ENST00000477421 ARHGAP24Q8N264 748 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 CYTH2Q99418 400 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 MRPL42Q9Y6G3 142 aaKnown RBP11.58□□□□□ -0.56
COL27A1-204ENST00000477421 PLIN4Q96Q06 1357 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 ROBO1Q9Y6N7 1651 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 ABCC6O95255 1503 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 ATP9BO43861 1147 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 MOCS2O96007 188 aaPredicted RBP11.58□□□□□ -0.56
COL27A1-204ENST00000477421 PTGER2P43116 358 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 ALDH5A1P51649 535 aaPredicted RBP11.58□□□□□ -0.56
COL27A1-204ENST00000477421 NIPA1Q7RTP0 329 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 SCN4BQ8IWT1 228 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 SIX2Q9NPC8 291 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 NUP98P52948 1817 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 LOC102724159A0A0B4J2E5 919 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 ADCY3O60266 1144 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 LCA5LO95447 670 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 TTC4O95801 387 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 HSD17B4P51659 736 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 PWP2Q15269 919 aaKnown RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 SLC9A9Q8IVB4 645 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 PIH1D1Q9NWS0 290 aaKnown RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 MAP3K20Q9NYL2 800 aaKnown RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 DDX20Q9UHI6 824 aaKnown RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 SLIT2O94813 1529 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 COL14A1Q05707 1796 aaKnown RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 MAPTP10636 758 aaKnown RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 MPZL3Q6UWV2 235 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 PARP9Q8IXQ6 854 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 LMNTD2Q8IXW0 634 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 LRRC57Q8N9N7 239 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 TXLNGQ9NUQ3 528 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 PRMT7Q9NVM4 692 aaPredicted RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 ZC3H7BQ9UGR2 993 aaKnown RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 ZFP69BQ9UJL9 534 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 CCT8L1PA6NM43 557 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 B4GALT5O43286 388 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 SSTR1P30872 391 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 HNRNPH1P31943 449 aaKnown RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 RNASELQ05823 741 aaKnown RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 KLHL38Q2WGJ6 581 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 DCAF6Q58WW2 860 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 LVRNQ6Q4G3 990 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 CLEC4DQ8WXI8 215 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 ASCC2Q9H1I8 757 aaPredicted RBP11.57□□□□□ -0.56
COL27A1-204ENST00000477421 IFT122Q9HBG6 1241 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 CD248Q9HCU0 757 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 UBN1Q9NPG3 1134 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 NAALADL1Q9UQQ1 740 aa11.57□□□□□ -0.56
COL27A1-204ENST00000477421 GYG2O15488 501 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 KRT38O76015 456 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 GOLGA7BQ2TAP0 167 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 PAN2Q504Q3 1202 aaKnown RBP11.56□□□□□ -0.56
COL27A1-204ENST00000477421 TFDP3Q5H9I0 405 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 GBP7Q8N8V2 638 aaPredicted RBP11.56□□□□□ -0.56
COL27A1-204ENST00000477421 N4BP2L2Q92802 583 aaPredicted RBP11.56□□□□□ -0.56
COL27A1-204ENST00000477421 DCLK3Q9C098 648 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 ARL2BPQ9Y2Y0 163 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 CCL15-CCL14A0A0B4J2E2 113 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 APOL1O14791 398 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 GH1P01241 217 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 C6orf222P0C671 652 aaPredicted RBP11.56□□□□□ -0.56
COL27A1-204ENST00000477421 PECAM1P16284 738 aaPredicted RBP11.56□□□□□ -0.56
COL27A1-204ENST00000477421 TAP1Q03518 808 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 CCL15Q16663 113 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 HSDL1Q3SXM5 330 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 SPOCD1Q6ZMY3 1216 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 CCDC97Q96F63 343 aaPredicted RBP11.56□□□□□ -0.56
COL27A1-204ENST00000477421 CLMNQ96JQ2 1002 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 PPP1R36Q96LQ0 422 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 SLC40A1Q9NP59 571 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 MYH8P13535 1937 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 SPDYE16A6NNV3 312 aaPredicted RBP11.56□□□□□ -0.56
COL27A1-204ENST00000477421 ZC3H11AO75152 810 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL27A1-204ENST00000477421 CYP2C9P11712 490 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 HIRAP54198 1017 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms