RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 NDUFV1P49821 464 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 RAB33AQ14088 237 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 BMS1Q14692 1282 aaKnown RBP16.98■□□□□ 0.31
COPS3-207ENST00000477299 WDR44Q5JSH3 913 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 SLC8B1Q6J4K2 584 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 TRIM65Q6PJ69 517 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 GBP6Q6ZN66 633 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 DPH6Q7L8W6 267 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 GPR65Q8IYL9 337 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 TMEM86AQ8N2M4 240 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 TTC9BQ8N6N2 239 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 C12orf76Q8N812 135 aaPredicted RBP16.98■□□□□ 0.31
COPS3-207ENST00000477299 KREMEN1Q96MU8 473 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 PKMYT1Q99640 499 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 ZCWPW1Q9H0M4 648 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.98■□□□□ 0.31
COPS3-207ENST00000477299 STK39Q9UEW8 545 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 CDH22Q9UJ99 828 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 GTF3C4Q9UKN8 822 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 DSEQ9UL01 958 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 BARX2Q9UMQ3 279 aaPredicted RBP16.98■□□□□ 0.31
COPS3-207ENST00000477299 TBX10O75333 385 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 ABLIM3O94929 683 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 CAVIN2O95810 425 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 NDST1P52848 882 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 CUL2Q13617 745 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 EXOC3L4Q17RC7 722 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 SLC39A12Q504Y0 691 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 EP400NLQ6ZTU2 488 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 THEM5Q8N1Q8 247 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 EFHBQ8N7U6 833 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 UBR7Q8N806 425 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 MAFAQ8NHW3 353 aaPredicted RBP16.97■□□□□ 0.31
COPS3-207ENST00000477299 NT5C1BQ96P26 610 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 APOL5Q9BWW9 433 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 RHOBTB2Q9BYZ6 727 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 IMPG2Q9BZV3 1241 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 ELOVL4Q9GZR5 314 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 SNX25Q9H3E2 840 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 CLDND1Q9NY35 253 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 CLEC1BQ9P126 229 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 STXBP5LQ9Y2K9 1186 aa16.97■□□□□ 0.31
COPS3-207ENST00000477299 SPTBN5Q9NRC6 3674 aaKnown RBP16.97■□□□□ 0.31
COPS3-207ENST00000477299 NOTCH4Q99466 2003 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 A8MXQ7 604 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 RNF225M0QZC1 329 aaPredicted RBP16.96■□□□□ 0.31
COPS3-207ENST00000477299 EPHB6O15197 1021 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 AP5Z1O43299 807 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 RFPL2O75678 378 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 SOAT2O75908 522 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 ADH1AP07327 375 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 CPB1P15086 417 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 ACO1P21399 889 aaKnown RBP16.96■□□□□ 0.31
COPS3-207ENST00000477299 LHX1P48742 406 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 FANCCQ00597 558 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 CTC1Q2NKJ3 1217 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 ZNF394Q53GI3 561 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 PDXDC1Q6P996 788 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 ACOT1Q86TX2 421 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 PPM1KQ8N3J5 372 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 ATAD1Q8NBU5 361 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 CCDC150Q8NCX0 1101 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 SYT15Q9BQS2 421 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 ACBD6Q9BR61 282 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 LSM14BQ9BX40 385 aaKnown RBP16.96■□□□□ 0.31
COPS3-207ENST00000477299 UBE2TQ9NPD8 197 aaPredicted RBP16.96■□□□□ 0.31
COPS3-207ENST00000477299 RTN4Q9NQC3 1192 aaKnown RBP16.96■□□□□ 0.31
COPS3-207ENST00000477299 CISHQ9NSE2 258 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 SLC27A5Q9Y2P5 690 aa16.96■□□□□ 0.31
COPS3-207ENST00000477299 GTPBP10A4D1E9 387 aaKnown RBP16.95■□□□□ 0.3
COPS3-207ENST00000477299 MTMR11A4FU01 709 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 OR6C75A6NL08 312 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 LGALS16A8MUM7 142 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 GOLGA6L19H0YKK7 550 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 NOL4O94818 638 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 PTPN1P18031 435 aaKnown RBP16.95■□□□□ 0.3
COPS3-207ENST00000477299 UBXN1Q04323 297 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 ADCY1Q08828 1119 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 CETN1Q12798 172 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 GPR17Q13304 367 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 COL19A1Q14993 1142 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 SYCP1Q15431 976 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 SKIV2LQ15477 1246 aaKnown RBP16.95■□□□□ 0.3
COPS3-207ENST00000477299 CLUL1Q15846 466 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 INTS6LQ5JSJ4 861 aaKnown RBP16.95■□□□□ 0.3
COPS3-207ENST00000477299 C12orf29Q8N999 325 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 KREMEN2Q8NCW0 462 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 ZNF461Q8TAF7 563 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 MAN1C1Q9NR34 630 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 SIK3Q9Y2K2 1263 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 GREB1Q4ZG55 1949 aa16.95■□□□□ 0.3
COPS3-207ENST00000477299 ARHGEF37A1IGU5 675 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 CLDN5O00501 218 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 CILPO75339 1184 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 GLUD1P00367 558 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 PNMA6AP0CW24 399 aaPredicted RBP16.94■□□□□ 0.3
COPS3-207ENST00000477299 P4HA1P13674 534 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 CREMQ03060 361 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 INCA1Q0VD86 236 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 DUSP4Q13115 394 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms