RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 NFX1Q12986 1120 aaKnown RBP12.17□□□□□ -0.46
NUP188-205ENST00000477069 SLMAPQ14BN4 828 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 WDR72Q3MJ13 1102 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 ATP13A4Q4VNC1 1196 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 CYP4A22Q5TCH4 519 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 CCDC50Q8IVM0 306 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 RCOR2Q8IZ40 523 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 ATL2Q8NHH9 583 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 SNF8Q96H20 258 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 TJP2Q9UDY2 1190 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 STRIP2Q9ULQ0 834 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 IVNS1ABPQ9Y6Y0 642 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 SRRM3A6NNA2 597 aaPredicted RBP12.16□□□□□ -0.46
NUP188-205ENST00000477069 MED7O43513 233 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 LSP1P33241 339 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
NUP188-205ENST00000477069 PIGHQ14442 188 aaPredicted RBP12.16□□□□□ -0.46
NUP188-205ENST00000477069 SLC29A2Q14542 456 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 FAM110CQ1W6H9 321 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 DENND2CQ68D51 928 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 TXNRD3NBQ6F5E7 133 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 NPLOC4Q8TAT6 608 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 PGM2Q96G03 612 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 TINF2Q9BSI4 451 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 CYP3A43Q9HB55 503 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 KLHL11Q9NVR0 708 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 C2CD2Q9Y426 696 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 CAND2O75155 1236 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 KLRC2P26717 231 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 ACVR2BQ13705 512 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 KRT71Q3SY84 523 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 TNFAIP8L3Q5GJ75 292 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 SPRYD7Q5W111 196 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 DRICH1Q6PGQ1 229 aaPredicted RBP12.16□□□□□ -0.46
NUP188-205ENST00000477069 ZNF410Q86VK4 478 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 RBM41Q96IZ5 413 aaKnown RBP12.16□□□□□ -0.46
NUP188-205ENST00000477069 ABHD16BQ9H3Z7 469 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 NOVA2Q9UNW9 492 aaKnown RBP12.16□□□□□ -0.46
NUP188-205ENST00000477069 CEP83Q9Y592 693 aa12.16□□□□□ -0.46
NUP188-205ENST00000477069 C3orf70A6NLC5 250 aaPredicted RBP12.15□□□□□ -0.46
NUP188-205ENST00000477069 SIGLEC16A6NMB1 481 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 FGFR4P22455 802 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 GABRB2P47870 512 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 COPS2P61201 443 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 PPP2R2AP63151 447 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 SLC25A11Q02978 314 aaKnown RBP12.15□□□□□ -0.46
NUP188-205ENST00000477069 PTPN11Q06124 597 aaPredicted RBP12.15□□□□□ -0.46
NUP188-205ENST00000477069 INCA1Q0VD86 236 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 CALCOCO2Q13137 446 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 TMEM132DQ14C87 1099 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 MFSD7Q6UXD7 560 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 DPP9Q86TI2 863 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 HOOK3Q86VS8 718 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 XYLT1Q86Y38 959 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 ARFGAP2Q8N6H7 521 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 ARFGAP1Q8N6T3 406 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 FNIP1Q8TF40 1166 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 NLRP7Q8WX94 980 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 ADAMTS10Q9H324 1103 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 CENPHQ9H3R5 247 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 FAM124BQ9H5Z6 455 aaPredicted RBP12.15□□□□□ -0.46
NUP188-205ENST00000477069 FEZ2Q9UHY8 353 aaPredicted RBP12.15□□□□□ -0.46
NUP188-205ENST00000477069 ITGA11Q9UKX5 1188 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.15□□□□□ -0.46
NUP188-205ENST00000477069 LIASO43766 372 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 GAS8O95995 478 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 POLR2BP30876 1174 aaKnown RBP12.15□□□□□ -0.46
NUP188-205ENST00000477069 CHKAP35790 457 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 GRM5P41594 1212 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 PTGISQ16647 500 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 IQSEC1Q6DN90 963 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 SPOCD1Q6ZMY3 1216 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 POLNQ7Z5Q5 900 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 PLEKHH3Q7Z736 793 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 TMEM176AQ96HP8 235 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 CPXM1Q96SM3 734 aa12.15□□□□□ -0.46
NUP188-205ENST00000477069 PARK7Q99497 189 aaKnown RBP12.15□□□□□ -0.46
NUP188-205ENST00000477069 MICAL2O94851 1124 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 ERBB2P04626 1255 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 HPDP32754 393 aaPredicted RBP12.14□□□□□ -0.47
NUP188-205ENST00000477069 RFC1P35251 1148 aaPredicted RBP12.14□□□□□ -0.47
NUP188-205ENST00000477069 GJC1P36383 396 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 ITGA8P53708 1063 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 MAGOHP61326 146 aaKnown RBP12.14□□□□□ -0.47
NUP188-205ENST00000477069 ORC1Q13415 861 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 DGKDQ16760 1214 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 DCUN1D2Q6PH85 259 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 TRMT10CQ7L0Y3 403 aaKnown RBP12.14□□□□□ -0.47
NUP188-205ENST00000477069 NT5DC4Q86YG4 428 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 JOSD2Q8TAC2 188 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 BCAS4Q8TDM0 211 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 RAPGEF5Q92565 580 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 HPDLQ96IR7 371 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 FAM118BQ9BPY3 351 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 EPN3Q9H201 632 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 GBA2Q9HCG7 927 aaPredicted RBP12.14□□□□□ -0.47
NUP188-205ENST00000477069 ASIC3Q9UHC3 531 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms