RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 KREMEN1Q96MU8 473 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 NT5C1BQ96P26 610 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 BCO2Q9BYV7 579 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 APEX2Q9UBZ4 518 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 FBXL5Q9UKA1 691 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 POLIQ9UNA4 740 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 PRG3Q9Y2Y8 225 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-211ENST00000476994 HCFC2Q9Y5Z7 792 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 MYO10Q9HD67 2058 aa18.89■□□□□ 0.62
SREBF1-211ENST00000476994 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-211ENST00000476994 OR1G1P47890 313 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 SIGLEC14Q08ET2 396 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 LRMPQ12912 555 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 TBX2Q13207 712 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-211ENST00000476994 SV2CQ496J9 727 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 FIGNQ5HY92 759 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 IQCEQ6IPM2 695 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 RNF168Q8IYW5 571 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-211ENST00000476994 FAXDC2Q96IV6 333 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 RIPOR3Q96MK2 946 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 ARID3AQ99856 593 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 NIF3L1Q9GZT8 377 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 SDCBP2Q9H190 292 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 S1PR5Q9H228 398 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 FAM207AQ9NSI2 230 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-211ENST00000476994 DZANK1Q9NVP4 752 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 FHOD1Q9Y613 1164 aa18.89■□□□□ 0.61
SREBF1-211ENST00000476994 SPDYE4A6NLX3 237 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 KPNA7A9QM74 516 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 RNF225M0QZC1 329 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-211ENST00000476994 M0QZQ0 153 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 B3GAT3O94766 335 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 ALDH2P05091 517 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 UCHL3P15374 230 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 MTHFRP42898 656 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 BRCC3P46736 316 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 GCNT1Q02742 428 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 MYO1EQ12965 1108 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 WDR72Q3MJ13 1102 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 ZNF667Q5HYK9 610 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 SPECC1LQ69YQ0 1117 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 SYCE2Q6PIF2 218 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 DDX53Q86TM3 631 aaKnown RBP18.88■□□□□ 0.61
SREBF1-211ENST00000476994 ALYREFQ86V81 257 aaKnown RBP18.88■□□□□ 0.61
SREBF1-211ENST00000476994 PPFIBP1Q86W92 1011 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 SUSD3Q96L08 255 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 VN1R3Q9BXE9 311 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 IMPG2Q9BZV3 1241 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 GPR88Q9GZN0 384 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 ADAM7Q9H2U9 754 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 FAN1Q9Y2M0 1017 aa18.88■□□□□ 0.61
SREBF1-211ENST00000476994 CLASP2O75122 1294 aaKnown RBP18.87■□□□□ 0.61
SREBF1-211ENST00000476994 GYPCP04921 128 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 ACO1P21399 889 aaKnown RBP18.87■□□□□ 0.61
SREBF1-211ENST00000476994 PAX3P23760 479 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 JAM2P57087 298 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 NHLH1Q02575 133 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 CUL2Q13617 745 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 WDR44Q5JSH3 913 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 RRAGAQ7L523 313 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-211ENST00000476994 NEK11Q8NG66 645 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 HASPINQ8TF76 798 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 BAP1Q92560 729 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 IGSF21Q96ID5 467 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 SENP8Q96LD8 212 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 COLEC11Q9BWP8 271 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 ZBP1Q9H171 429 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 SMYD3Q9H7B4 428 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 ADAM28Q9UKQ2 775 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 DAAM1Q9Y4D1 1078 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 NME7Q9Y5B8 376 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 WDFY4Q6ZS81 3184 aa18.87■□□□□ 0.61
SREBF1-211ENST00000476994 MYH10P35580 1976 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 I3L4J1 428 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 CTSAP10619 480 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 RFX1P22670 979 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 SOWAHAQ2M3V2 549 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 ATAT1Q5SQI0 421 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 TMC6Q7Z403 805 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 PPM1KQ8N3J5 372 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 FBXL6Q8N531 539 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 TOP6BLQ8N6T0 577 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 KBTBD7Q8WVZ9 684 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 EMILIN2Q9BXX0 1053 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 GPR62Q9BZJ7 368 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 UBE2TQ9NPD8 197 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-211ENST00000476994 CEP72Q9P209 647 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 NXF1Q9UBU9 619 aaKnown RBP18.86■□□□□ 0.61
SREBF1-211ENST00000476994 DNAJC12Q9UKB3 198 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 L1RE1Q9UN81 338 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 SNX9Q9Y5X1 595 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 IRAK3Q9Y616 596 aa18.86■□□□□ 0.61
SREBF1-211ENST00000476994 A0A1W2PQJ5 194 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 CYP11A1P05108 521 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 SP100P23497 879 aaPredicted RBP18.85■□□□□ 0.61
SREBF1-211ENST00000476994 TBXAS1P24557 533 aaPredicted RBP18.85■□□□□ 0.61
SREBF1-211ENST00000476994 RAP1GAPP47736 663 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 PTPN5P54829 565 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 POLR2FP61218 127 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms