RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 KIAA0355O15063 1070 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 B3GAT3O94766 335 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 WARSP23381 471 aaKnown RBP30.65■■■□□ 2.5
VEGFA-211ENST00000476772 GATMP50440 423 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 WSCD1Q658N2 575 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 DENND1BQ6P3S1 775 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 DSTYKQ6XUX3 929 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 MCOLN2Q8IZK6 566 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 ABI1Q8IZP0 508 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 CRIPAKQ8N1N5 446 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 C1orf131Q8NDD1 294 aaKnown RBP30.65■■■□□ 2.5
VEGFA-211ENST00000476772 NAPGQ99747 312 aaPredicted RBP30.65■■■□□ 2.5
VEGFA-211ENST00000476772 DPEP3Q9H4B8 488 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 OSGEPQ9NPF4 335 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 KIAA1257Q9ULG3 409 aa30.65■■■□□ 2.5
VEGFA-211ENST00000476772 WDR3Q9UNX4 943 aaKnown RBP eCLIP30.65■■■□□ 2.5
VEGFA-211ENST00000476772 CTAGE9A4FU28 777 aa30.64■■■□□ 2.5
VEGFA-211ENST00000476772 O00370 1275 aa30.64■■■□□ 2.5
VEGFA-211ENST00000476772 LMO2P25791 158 aa30.64■■■□□ 2.5
VEGFA-211ENST00000476772 TIGD5Q53EQ6 642 aa30.64■■■□□ 2.5
VEGFA-211ENST00000476772 CD300LGQ6UXG3 332 aa30.64■■■□□ 2.5
VEGFA-211ENST00000476772 MON1BQ7L1V2 547 aa30.64■■■□□ 2.5
VEGFA-211ENST00000476772 C12orf29Q8N999 325 aa30.64■■■□□ 2.5
VEGFA-211ENST00000476772 TMEM35BQ8NCS4 154 aa30.64■■■□□ 2.5
VEGFA-211ENST00000476772 GTF3C4Q9UKN8 822 aa30.64■■■□□ 2.5
VEGFA-211ENST00000476772 MICAL2O94851 1124 aa30.63■■■□□ 2.49
VEGFA-211ENST00000476772 PDGFRBP09619 1106 aa30.63■■■□□ 2.49
VEGFA-211ENST00000476772 CDH5P33151 784 aaPredicted RBP30.63■■■□□ 2.49
VEGFA-211ENST00000476772 RNASELQ05823 741 aaKnown RBP30.63■■■□□ 2.49
VEGFA-211ENST00000476772 CNGA2Q16280 664 aa30.63■■■□□ 2.49
VEGFA-211ENST00000476772 UBE2Q1Q7Z7E8 422 aa30.63■■■□□ 2.49
VEGFA-211ENST00000476772 HASPINQ8TF76 798 aa30.63■■■□□ 2.49
VEGFA-211ENST00000476772 CASD1Q96PB1 797 aa30.63■■■□□ 2.49
VEGFA-211ENST00000476772 CHORDC1Q9UHD1 332 aaPredicted RBP30.63■■■□□ 2.49
VEGFA-211ENST00000476772 STXBP5LQ9Y2K9 1186 aa30.63■■■□□ 2.49
VEGFA-211ENST00000476772 CEP83Q9Y592 693 aa30.63■■■□□ 2.49
VEGFA-211ENST00000476772 PCDHGC5Q9Y5F6 944 aa30.63■■■□□ 2.49
VEGFA-211ENST00000476772 GRID2IPA4D2P6 1211 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 PALMO75781 387 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 IKBKEQ14164 716 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 IFI16Q16666 785 aaKnown RBP30.62■■■□□ 2.49
VEGFA-211ENST00000476772 LIN28BQ6ZN17 250 aaKnown RBP eCLIP30.62■■■□□ 2.49
VEGFA-211ENST00000476772 PHF13Q86YI8 300 aaPredicted RBP30.62■■■□□ 2.49
VEGFA-211ENST00000476772 NPAS4Q8IUM7 802 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 RHOT2Q8IXI1 618 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 COLGALT2Q8IYK4 626 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 WDTC1Q8N5D0 677 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 C11orf70Q9BRQ4 267 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 LHX5Q9H2C1 402 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 COG5Q9UP83 839 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 F8W810 466 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 I3L4J1 428 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 CYP1A2P05177 515 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 FAM163BP0C2L3 166 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 RAG1P15918 1043 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 BRCC3P46736 316 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 C2CD6Q53TS8 623 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 PPP1R2P3Q6NXS1 205 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 DCLRE1AQ6PJP8 1040 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 TPCN2Q8NHX9 752 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 ZNF518BQ9C0D4 1074 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 CTTNBP2NLQ9P2B4 639 aa30.62■■■□□ 2.49
VEGFA-211ENST00000476772 CNOT8Q9UFF9 292 aaKnown RBP30.62■■■□□ 2.49
VEGFA-211ENST00000476772 ENC1O14682 589 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 HOXA2O43364 376 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 KIF4AO95239 1232 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 ITGB1P05556 798 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 TRIM11Q96F44 468 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 FAM193BQ96PV7 902 aaPredicted RBP30.61■■■□□ 2.49
VEGFA-211ENST00000476772 LPIN3Q9BQK8 851 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 FAM49BQ9NUQ9 324 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 ADAM22Q9P0K1 906 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 PCDH10Q9P2E7 1040 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 DNAJB4Q9UDY4 337 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 TSPAN16Q9UKR8 245 aa30.61■■■□□ 2.49
VEGFA-211ENST00000476772 TIMM13Q9Y5L4 95 aaPredicted RBP30.61■■■□□ 2.49
VEGFA-211ENST00000476772 M0QYV0 167 aa30.6■■■□□ 2.49
VEGFA-211ENST00000476772 GABRDO14764 452 aa30.6■■■□□ 2.49
VEGFA-211ENST00000476772 URI1O94763 535 aaPredicted RBP30.6■■■□□ 2.49
VEGFA-211ENST00000476772 CSF2RAP15509 400 aa30.6■■■□□ 2.49
VEGFA-211ENST00000476772 PTP4A2Q12974 167 aa30.6■■■□□ 2.49
VEGFA-211ENST00000476772 TCEAL1Q15170 157 aa30.6■■■□□ 2.49
VEGFA-211ENST00000476772 PPP1R26Q5T8A7 1209 aaPredicted RBP30.6■■■□□ 2.49
VEGFA-211ENST00000476772 LCLAT1Q6UWP7 414 aa30.6■■■□□ 2.49
VEGFA-211ENST00000476772 MMS22LQ6ZRQ5 1243 aa30.6■■■□□ 2.49
VEGFA-211ENST00000476772 CRYBG2Q8N1P7 616 aa30.6■■■□□ 2.49
VEGFA-211ENST00000476772 TMEM86AQ8N2M4 240 aa30.6■■■□□ 2.49
VEGFA-211ENST00000476772 TSC2P49815 1807 aa30.6■■■□□ 2.49
VEGFA-211ENST00000476772 LTBP2Q14767 1821 aa30.59■■■□□ 2.49
VEGFA-211ENST00000476772 ATP1A1P05023 1023 aaKnown RBP30.59■■■□□ 2.49
VEGFA-211ENST00000476772 MYBL1P10243 752 aa30.59■■■□□ 2.49
VEGFA-211ENST00000476772 MMP8P22894 467 aa30.59■■■□□ 2.49
VEGFA-211ENST00000476772 STILQ15468 1287 aa30.59■■■□□ 2.49
VEGFA-211ENST00000476772 MKI67P46013 3256 aaKnown RBP30.59■■■□□ 2.49
VEGFA-211ENST00000476772 ODC1P11926 461 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 RRM1P23921 792 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 OR1G1P47890 313 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 C1QBPQ07021 282 aaKnown RBP30.58■■■□□ 2.49
VEGFA-211ENST00000476772 GOLGA7BQ2TAP0 167 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 PHLDB2Q86SQ0 1253 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms