RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 IFI35P80217 286 aaPredicted RBP17.41■□□□□ 0.38
TMEM53-208ENST00000476724 TRPC3Q13507 836 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 ACVR2BQ13705 512 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 LAMC2Q13753 1193 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 SEZ6Q53EL9 994 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 PRAMEF19Q5SWL8 479 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 DRICH1Q6PGQ1 229 aaPredicted RBP17.41■□□□□ 0.38
TMEM53-208ENST00000476724 RELL1Q8IUW5 271 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 MDM1Q8TC05 714 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 P3H4Q92791 437 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 SEC16BQ96JE7 1060 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 CABS1Q96KC9 395 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 HEMGNQ9BXL5 484 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 PCDHGC3Q9UN70 934 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 SMIM23A6NLE4 172 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 TCEA3O75764 348 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 CDH5P33151 784 aaPredicted RBP17.4■□□□□ 0.38
TMEM53-208ENST00000476724 SSR1P43307 286 aaKnown RBP17.4■□□□□ 0.38
TMEM53-208ENST00000476724 SLC26A2P50443 739 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 NFX1Q12986 1120 aaKnown RBP17.4■□□□□ 0.38
TMEM53-208ENST00000476724 IFT88Q13099 833 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 ZBTB33Q86T24 672 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 INTS9Q9NV88 658 aaKnown RBP17.4■□□□□ 0.38
TMEM53-208ENST00000476724 USTQ9Y2C2 406 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 R3HDM2Q9Y2K5 976 aaKnown RBP17.4■□□□□ 0.38
TMEM53-208ENST00000476724 CEP83Q9Y592 693 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 TJP3O95049 919 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 ZNF286BP0CG31 522 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 SRGAP2CP0DJJ0 459 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 DRD4P21917 467 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 MYL6P60660 151 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 MAP2K5Q13163 448 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 TFDP1Q14186 410 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 PIGHQ14442 188 aaPredicted RBP17.4■□□□□ 0.38
TMEM53-208ENST00000476724 RNF149Q8NC42 400 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 UHMK1Q8TAS1 419 aaKnown RBP17.4■□□□□ 0.38
TMEM53-208ENST00000476724 ATXN2LQ8WWM7 1075 aaKnown RBP17.4■□□□□ 0.38
TMEM53-208ENST00000476724 FAXDC2Q96IV6 333 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 MTMR12Q9C0I1 747 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 CISHQ9NSE2 258 aa17.4■□□□□ 0.38
TMEM53-208ENST00000476724 ABT1Q9ULW3 272 aaKnown RBP17.4■□□□□ 0.38
TMEM53-208ENST00000476724 TCRBV5S1A1TA0A578 114 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 TTLL13PA6NNM8 815 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 ABLIM1O14639 778 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 CCL14Q16627 93 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 QPCTQ16769 361 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 DNAJC24Q6P3W2 148 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 TSHZ1Q6ZSZ6 1077 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 CCDC121Q6ZUS5 278 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 PPTC7Q8NI37 304 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 ZNF317Q96PQ6 595 aaPredicted RBP17.39■□□□□ 0.37
TMEM53-208ENST00000476724 ABHD16BQ9H3Z7 469 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 GPBP1L1Q9HC44 474 aaPredicted RBP17.39■□□□□ 0.37
TMEM53-208ENST00000476724 ZSWIM8A7E2V4 1837 aa17.39■□□□□ 0.37
TMEM53-208ENST00000476724 ACKR2O00590 384 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 NDC80O14777 642 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 KIF3CO14782 793 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 ASAP2O43150 1006 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 B4GALT4O60513 344 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 GJB1P08034 283 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 PROZP22891 400 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 PTPN7P35236 360 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 CHKAP35790 457 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 SLCO1A2P46721 670 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 CRHR2Q13324 411 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 RNF187Q5TA31 235 aaPredicted RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 MPZL3Q6UWV2 235 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 PACS2Q86VP3 889 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 IPO4Q8TEX9 1081 aaKnown RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 EMID1Q96A84 441 aaPredicted RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 ACTR5Q9H9F9 607 aaPredicted RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 DDX56Q9NY93 547 aaKnown RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 ERAP1Q9NZ08 941 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 STRIP2Q9ULQ0 834 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 DRG1Q9Y295 367 aaKnown RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 O00370 1275 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 HBP1O60381 514 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 ACSL3O95573 720 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 TNNC2P02585 160 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 CD58P19256 250 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 CTGFP29279 349 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 SSTR3P32745 418 aaPredicted RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 RPL7AP62424 266 aaKnown RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 IGBP1P78318 339 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 DUSP28Q4G0W2 176 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 UBAP2Q5T6F2 1119 aaKnown RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 DAB2IPQ5VWQ8 1189 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 DCUN1D2Q6PH85 259 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 EXOC3L1Q86VI1 746 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 NIPA2Q8N8Q9 360 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 FAM212AQ96EL1 285 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 ANKRD36BP1Q96IX9 119 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 ZNF668Q96K58 619 aaPredicted RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 SLITRK1Q96PX8 696 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 CCDC77Q9BR77 488 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 C16orf70Q9BSU1 422 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 DDX23Q9BUQ8 820 aaKnown RBP17.38■□□□□ 0.37
TMEM53-208ENST00000476724 PTPRHQ9HD43 1115 aa17.38■□□□□ 0.37
TMEM53-208ENST00000476724 KLRC2P26717 231 aa17.37■□□□□ 0.37
TMEM53-208ENST00000476724 TRIP13Q15645 432 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms