RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 FBXO16Q8IX29 292 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SNX31Q8N9S9 440 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 OR6B3Q8NGW1 331 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ADAM32Q8TC27 787 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SH3TC2Q8TF17 1288 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 NLRP7Q8WX94 980 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 MOCOSQ96EN8 888 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 CLPTM1LQ96KA5 538 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 FAM81BQ96LP2 452 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 FAM20AQ96MK3 541 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 PTPN18Q99952 460 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 DHX35Q9H5Z1 703 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 VCPKMTQ9H867 229 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 PDGFCQ9NRA1 345 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SCHIP1Q9P0W5 487 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 AGAP1Q9UPQ3 857 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 IVNS1ABPQ9Y6Y0 642 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 CYP3A7-CYP3A51PA0A087WV96 503 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 KCNN4O15554 427 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 LPXNO60711 386 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 NPTXRO95502 500 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 PECAM1P16284 738 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 CHRNA3P32297 505 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 GLRBP48167 497 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 AARSP49588 968 aaKnown RBP eCLIP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 NME5P56597 212 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 TAS2R40P59535 323 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ZNF699Q32M78 642 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 TAF1BQ53T94 588 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 DCAF15Q66K64 600 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SPNS2Q8IVW8 549 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 LMNTD2Q8IXW0 634 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 BRI3BPQ8WY22 251 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SNF8Q96H20 258 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SIK2Q9H0K1 926 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ASCC2Q9H1I8 757 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 BTBD7Q9P203 1132 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SLC17A6Q9P2U8 582 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 CACNG4Q9UBN1 327 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 POLIQ9UNA4 740 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 KIF3CO14782 793 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 TRAPPC3O43617 180 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 RTN2O75298 545 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 PDE5AO76074 875 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 SEC24DO94855 1032 aaPredicted RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CPP00450 1065 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 NR3C2P08235 984 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 ATP6V1B1P15313 513 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 ATP2A2P16615 1042 aaKnown RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 BGNP21810 368 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 ATP5DP30049 168 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 RPA3P35244 121 aaPredicted RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 HOXD13P35453 343 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 MYL6P60660 151 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CAP1Q01518 475 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CDR2Q01850 454 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 GABPAQ06546 454 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 AP3B2Q13367 1082 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 TAF5Q15542 800 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 TMEM119Q4V9L6 283 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 SCARA3Q6AZY7 606 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 TXNRD3NBQ6F5E7 133 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 PPP4R3CPQ6ZMV5 832 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 DPP9Q86TI2 863 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 EXOC3L1Q86VI1 746 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 LCA5Q86VQ0 697 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CPB2Q96IY4 423 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 SLITRK6Q9H5Y7 841 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 TMEM206Q9H813 350 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 NOP53Q9NZM5 478 aaKnown RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 COL20A1Q9P218 1284 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 PHTF1Q9UMS5 762 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 HES2Q9Y543 173 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CCDC88AQ3V6T2 1871 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 MYH3P11055 1940 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 MICAL3Q7RTP6 2002 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CAPN9O14815 690 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 MCF2LO15068 1137 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 TPST1O60507 370 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 ATP6V1G2O95670 118 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 ZBED1O96006 694 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 MOCS2O96007 188 aaPredicted RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 TMEM253P0C7T8 217 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 RBP3P10745 1247 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 AVPR1AP37288 418 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 MAPK10P53779 464 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 ARPP19P56211 112 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 BACE1P56817 501 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 THOC5Q13769 683 aaKnown RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 NCOA4Q13772 614 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 TMEM132BQ14DG7 1078 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 COBLL1Q53SF7 1204 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 THEMIS2Q5TEJ8 643 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 C1orf146Q5VVC0 180 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CAPRIN2Q6IMN6 1127 aaKnown RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 APOBEC3FQ8IUX4 373 aaKnown RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 PDIK1LQ8N165 341 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 GALNT4Q8N4A0 578 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 SPATA6LQ8N4H0 392 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CCNYL1Q8N7R7 359 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms