RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 PARD3BQ8TEW8 1205 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 KBTBD7Q8WVZ9 684 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 PKMYT1Q99640 499 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 SEPT5Q99719 369 aaPredicted RBP22.72■■□□□ 1.23
LIME1-204ENST00000476183 KXD1Q9BQD3 176 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 LPIN3Q9BQK8 851 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 ACBD6Q9BR61 282 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 ABI2Q9NYB9 513 aaPredicted RBP22.72■■□□□ 1.23
LIME1-204ENST00000476183 TRAF3IP3Q9Y228 551 aa22.72■■□□□ 1.23
LIME1-204ENST00000476183 LRRIQ3A6PVS8 624 aaPredicted RBP22.71■■□□□ 1.23
LIME1-204ENST00000476183 ATF6P18850 670 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 CLDN10P78369 228 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 TSPY1Q01534 308 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 FAM160A1Q05DH4 1040 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 SMARCB1Q12824 385 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 MGAT5BQ3V5L5 792 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 INTS6LQ5JSJ4 861 aaKnown RBP22.71■■□□□ 1.23
LIME1-204ENST00000476183 IER5LQ5T953 404 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 SMYD4Q8IYR2 804 aaPredicted RBP22.71■■□□□ 1.23
LIME1-204ENST00000476183 GUF1Q8N442 669 aaKnown RBP22.71■■□□□ 1.23
LIME1-204ENST00000476183 LEMD2Q8NC56 503 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 SHKBP1Q8TBC3 707 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 SPATA18Q8TC71 538 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 SPPL2BQ8TCT7 592 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 C2orf15Q8WU43 125 aaKnown RBP22.71■■□□□ 1.23
LIME1-204ENST00000476183 ZSWIM3Q96MP5 696 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 ZNF334Q9HCZ1 680 aaPredicted RBP22.71■■□□□ 1.23
LIME1-204ENST00000476183 FBXL21Q9UKT6 434 aa22.71■■□□□ 1.23
LIME1-204ENST00000476183 CALUO43852 315 aaPredicted RBP22.7■■□□□ 1.22
LIME1-204ENST00000476183 HAPLN1P10915 354 aaPredicted RBP22.7■■□□□ 1.22
LIME1-204ENST00000476183 FCARP24071 287 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 LHX1P48742 406 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 TUFMP49411 452 aaKnown RBP22.7■■□□□ 1.22
LIME1-204ENST00000476183 DLG4P78352 724 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 MYL7Q01449 175 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 TDRD10Q5VZ19 366 aaKnown RBP22.7■■□□□ 1.22
LIME1-204ENST00000476183 DPH6Q7L8W6 267 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 DNAJB7Q7Z6W7 309 aaPredicted RBP22.7■■□□□ 1.22
LIME1-204ENST00000476183 SIX5Q8N196 739 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 GPR152Q8TDT2 470 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 ERCC4Q92889 916 aaPredicted RBP22.7■■□□□ 1.22
LIME1-204ENST00000476183 PSMG2Q969U7 264 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 PLA2G2FQ9BZM2 168 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 XYLT2Q9H1B5 865 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 CIZ1Q9ULV3 898 aaPredicted RBP22.7■■□□□ 1.22
LIME1-204ENST00000476183 ARIH1Q9Y4X5 557 aaPredicted RBP22.7■■□□□ 1.22
LIME1-204ENST00000476183 ASB3Q9Y575 518 aa22.7■■□□□ 1.22
LIME1-204ENST00000476183 KRBA1A5PL33 1030 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 KIF20AO95235 890 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 NPR3P17342 541 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 LMO2P25791 158 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 AVPR2P30518 371 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 MYL6P60660 151 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 GPC5P78333 572 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 TEAD2Q15562 447 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 FAM78AQ5JUQ0 283 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 CEP135Q66GS9 1140 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 TANGO2Q6ICL3 276 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 CCDC34Q96HJ3 373 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 PI4K2AQ9BTU6 479 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 SLC2A4RGQ9NR83 387 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 WNT16Q9UBV4 365 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 GTF3C4Q9UKN8 822 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 NME7Q9Y5B8 376 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 PCDHB5Q9Y5E4 795 aa22.69■■□□□ 1.22
LIME1-204ENST00000476183 A0A1W2PRU2 124 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 MYBPHLA2RUH7 354 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 C4BPAP04003 597 aaKnown RBP22.68■■□□□ 1.22
LIME1-204ENST00000476183 WARSP23381 471 aaKnown RBP22.68■■□□□ 1.22
LIME1-204ENST00000476183 GPR15P49685 360 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 NFE2Q16621 373 aaPredicted RBP22.68■■□□□ 1.22
LIME1-204ENST00000476183 NFIL3Q16649 462 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 ZCWPW2Q504Y3 356 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 C1orf220Q5T0J3 134 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 CWF19L1Q69YN2 538 aaKnown RBP22.68■■□□□ 1.22
LIME1-204ENST00000476183 GAREM2Q75VX8 874 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 GIPC2Q8TF65 315 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 ASB16Q96NS5 453 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 MMS19Q96T76 1030 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 MRPL45Q9BRJ2 306 aaKnown RBP22.68■■□□□ 1.22
LIME1-204ENST00000476183 CA14Q9ULX7 337 aa22.68■■□□□ 1.22
LIME1-204ENST00000476183 ATP2C2O75185 946 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 GADD45BO75293 160 aaPredicted RBP22.67■■□□□ 1.22
LIME1-204ENST00000476183 ECI2O75521 394 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 AKAP3O75969 853 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 VNN1O95497 513 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 STAU1O95793 577 aaKnown RBP22.67■■□□□ 1.22
LIME1-204ENST00000476183 NR2F2P24468 414 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 PCSK1P29120 753 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 TRPC3Q13507 836 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 WDR72Q3MJ13 1102 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 STXBP5Q5T5C0 1151 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 FAM171BQ6P995 826 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 ITIH5Q86UX2 942 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 TMEM105Q8N8V8 129 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 SPATA20Q8TB22 786 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 FAM200AQ8TCP9 573 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 ELMO3Q96BJ8 720 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 TIGD1Q96MW7 591 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 MFSD1Q9H3U5 465 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms