RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 PNMA8AQ86V59 439 aaPredicted RBP6.17□□□□□ -1.42
PRKD3-208ENST00000475912 LINC00476Q8WZB0 136 aa6.17□□□□□ -1.42
PRKD3-208ENST00000475912 CAVIN3Q969G5 261 aa6.17□□□□□ -1.42
PRKD3-208ENST00000475912 MARS2Q96GW9 593 aaKnown RBP6.17□□□□□ -1.42
PRKD3-208ENST00000475912 SMAD5Q99717 465 aaKnown RBP6.17□□□□□ -1.42
PRKD3-208ENST00000475912 STK26Q9P289 416 aa6.17□□□□□ -1.42
PRKD3-208ENST00000475912 COL4A3BPQ9Y5P4 624 aa6.17□□□□□ -1.42
PRKD3-208ENST00000475912 EPN1Q9Y6I3 576 aaPredicted RBP6.17□□□□□ -1.42
PRKD3-208ENST00000475912 POLR2AP24928 1970 aaKnown RBP6.17□□□□□ -1.42
PRKD3-208ENST00000475912 TRPM3Q9HCF6 1732 aaPredicted RBP6.16□□□□□ -1.42
PRKD3-208ENST00000475912 CRYBG1Q9Y4K1 1723 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 DLC1Q96QB1 1528 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 CCDC154A6NI56 674 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 LMNAP02545 664 aaKnown RBP6.16□□□□□ -1.42
PRKD3-208ENST00000475912 HKR1P10072 659 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 EGR2P11161 476 aaPredicted RBP6.16□□□□□ -1.42
PRKD3-208ENST00000475912 EDNRBP24530 442 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 SLC6A4P31645 630 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 AVPR1BP47901 424 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 ATP2B3Q16720 1220 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 PTPN21Q16825 1174 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 DACT2Q5SW24 774 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 PTF1AQ7RTS3 328 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 GPR149Q86SP6 731 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 TBC1D15Q8TC07 691 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 IFI44Q8TCB0 444 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 KAT5Q92993 513 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 PCDH12Q9NPG4 1184 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 HSFX1Q9UBD0 423 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 TESQ9UGI8 421 aaKnown RBP6.16□□□□□ -1.42
PRKD3-208ENST00000475912 SERPINB13Q9UIV8 391 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 KCNE5Q9UJ90 142 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 MTO1Q9Y2Z2 717 aaKnown RBP6.16□□□□□ -1.42
PRKD3-208ENST00000475912 TNKSO95271 1327 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 ALS2Q96Q42 1657 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 ROCK1Q13464 1354 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 ABCC11Q96J66 1382 aa6.16□□□□□ -1.42
PRKD3-208ENST00000475912 CHD4Q14839 1912 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 GRM6O15303 877 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 ERN1O75460 977 aaKnown RBP6.15□□□□□ -1.42
PRKD3-208ENST00000475912 SBK3P0C264 359 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 TGM1P22735 817 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 SEC24CP53992 1094 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 KRT85P78386 507 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 SLFN5Q08AF3 891 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 FOXI1Q12951 378 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 ODF1Q14990 250 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 FOXR2Q6PJQ5 311 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 DNAJC10Q8IXB1 793 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 SLC44A3Q8N4M1 653 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 NUP133Q8WUM0 1156 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 NACC2Q96BF6 587 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 COA7Q96BR5 231 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 COQ10AQ96MF6 247 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 PRDM11Q9NQV5 511 aa6.15□□□□□ -1.42
PRKD3-208ENST00000475912 ADGRF5Q8IZF2 1346 aa6.15□□□□□ -1.43
PRKD3-208ENST00000475912 RGPD8O14715 1765 aaPredicted RBP6.15□□□□□ -1.43
PRKD3-208ENST00000475912 KIAA0232Q92628 1395 aa6.15□□□□□ -1.43
PRKD3-208ENST00000475912 KNDC1Q76NI1 1749 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 PEAK1Q9H792 1746 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 IFT172Q9UG01 1749 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 RGPD3A6NKT7 1758 aaPredicted RBP6.14□□□□□ -1.43
PRKD3-208ENST00000475912 PPLO60437 1756 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 RGPD4Q7Z3J3 1758 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 SGTAO43765 313 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 HAUS5O94927 633 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 ZFPL1O95159 310 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 FCER1AP12319 257 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 FDXRP22570 491 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 ADRA1BP35368 520 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 ZNF280AP59817 542 aaPredicted RBP6.14□□□□□ -1.43
PRKD3-208ENST00000475912 UAP1L1Q3KQV9 507 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 OLFML1Q6UWY5 402 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 NLGN4YQ8NFZ3 816 aaPredicted RBP6.14□□□□□ -1.43
PRKD3-208ENST00000475912 BOD1Q96IK1 185 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 CLPTM1LQ96KA5 538 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 PNKPQ96T60 521 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 GALNT9Q9HCQ5 603 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 TMEM74BQ9NUR3 256 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 RPGRIP1LQ68CZ1 1315 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 MAP3K5Q99683 1374 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 SSH2Q76I76 1423 aa6.14□□□□□ -1.43
PRKD3-208ENST00000475912 KIF1BO60333 1816 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 NUDT3O95989 172 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 MTHFD1P11586 935 aaKnown RBP6.13□□□□□ -1.43
PRKD3-208ENST00000475912 HSPA6P17066 643 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 PLA2G5P39877 138 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 BLOC1S1P78537 153 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 GPR162Q16538 588 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 CYP2A13Q16696 494 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 GEN1Q17RS7 908 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 PABPC1LQ4VXU2 614 aaKnown RBP6.13□□□□□ -1.43
PRKD3-208ENST00000475912 FAM43AQ8N2R8 423 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 MRGPRX4Q96LA9 322 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 Q96MF0 132 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 CRAMP1Q96RY5 1269 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 ASPSCR1Q9BZE9 553 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.13□□□□□ -1.43
PRKD3-208ENST00000475912 ZNHIT2Q9UHR6 403 aa6.13□□□□□ -1.43
PRKD3-208ENST00000475912 PCDHB1Q9Y5F3 818 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms