RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 TSPY1Q01534 308 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 SOWAHAQ2M3V2 549 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 CES5AQ6NT32 575 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 RSPO2Q6UXX9 243 aaPredicted RBP16.2■□□□□ 0.18
SNX13-207ENST00000475800 TRIM59Q8IWR1 403 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 DCP1BQ8IZD4 617 aaKnown RBP16.2■□□□□ 0.18
SNX13-207ENST00000475800 CMASQ8NFW8 434 aaPredicted RBP16.2■□□□□ 0.18
SNX13-207ENST00000475800 ENOX1Q8TC92 643 aaKnown RBP16.2■□□□□ 0.18
SNX13-207ENST00000475800 ACBD6Q9BR61 282 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 RHOBTB2Q9BYZ6 727 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 NAT10Q9H0A0 1025 aaKnown RBP16.2■□□□□ 0.18
SNX13-207ENST00000475800 ZDHHC7Q9NXF8 308 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 MAGEC2Q9UBF1 373 aaPredicted RBP16.2■□□□□ 0.18
SNX13-207ENST00000475800 COQ4Q9Y3A0 265 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 ARIH1Q9Y4X5 557 aaPredicted RBP16.2■□□□□ 0.18
SNX13-207ENST00000475800 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNX13-207ENST00000475800 WDR27A2RRH5 827 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 GABRDO14764 452 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 HNRNPA1P09651 372 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNX13-207ENST00000475800 ATF2P15336 505 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 WARSP23381 471 aaKnown RBP16.19■□□□□ 0.18
SNX13-207ENST00000475800 HOXA9P31269 272 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 ARPP19P56211 112 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 TYRO3Q06418 890 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 GPR17Q13304 367 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 SCARA3Q6AZY7 606 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 SYCE2Q6PIF2 218 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 TAS1R2Q8TE23 839 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 C2orf15Q8WU43 125 aaKnown RBP16.19■□□□□ 0.18
SNX13-207ENST00000475800 CNOT6LQ96LI5 555 aaKnown RBP16.19■□□□□ 0.18
SNX13-207ENST00000475800 MED15Q96RN5 788 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 ADAM7Q9H2U9 754 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 RAB20Q9NX57 234 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 DDX43Q9NXZ2 648 aaKnown RBP16.19■□□□□ 0.18
SNX13-207ENST00000475800 HSFX1Q9UBD0 423 aa16.19■□□□□ 0.18
SNX13-207ENST00000475800 NXF1Q9UBU9 619 aaKnown RBP16.19■□□□□ 0.18
SNX13-207ENST00000475800 ZMYND10O75800 440 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 PAPLNO95428 1278 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 WEE2P0C1S8 567 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 FMO5P49326 533 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 NOP14P78316 857 aaKnown RBP16.18■□□□□ 0.18
SNX13-207ENST00000475800 WDR44Q5JSH3 913 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 TCEAL8Q8IYN2 117 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 OR10T2Q8NGX3 314 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 EDAQ92838 391 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 PBXIP1Q96AQ6 731 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 RIPOR3Q96MK2 946 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 NECTIN4Q96NY8 510 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 PHF7Q9BWX1 381 aaPredicted RBP16.18■□□□□ 0.18
SNX13-207ENST00000475800 ZCWPW1Q9H0M4 648 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 S1PR5Q9H228 398 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 SNX25Q9H3E2 840 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 FAM124BQ9H5Z6 455 aaPredicted RBP16.18■□□□□ 0.18
SNX13-207ENST00000475800 C2orf16Q68DN1 1984 aa16.18■□□□□ 0.18
SNX13-207ENST00000475800 TMEM221A6NGB7 291 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 LOC730098B7Z3J9 87 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 M0R296 226 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 PRRG1O14668 218 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 AFPP02771 609 aaKnown RBP16.17■□□□□ 0.18
SNX13-207ENST00000475800 C8AP07357 584 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 POU2F2P09086 479 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 SPATA31D3P0C874 917 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 TRIM21P19474 475 aaKnown RBP16.17■□□□□ 0.18
SNX13-207ENST00000475800 GNL1P36915 607 aaPredicted RBP16.17■□□□□ 0.18
SNX13-207ENST00000475800 MTHFRP42898 656 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 ADCY1Q08828 1119 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 KCNH2Q12809 1159 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 MAPRE1Q15691 268 aaKnown RBP16.17■□□□□ 0.18
SNX13-207ENST00000475800 NFE2Q16621 373 aaPredicted RBP16.17■□□□□ 0.18
SNX13-207ENST00000475800 CBWD6Q4V339 395 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 CBWD3Q5JTY5 395 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 CBWD5Q5RIA9 395 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 PPM1LQ5SGD2 360 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 RARS2Q5T160 578 aaKnown RBP16.17■□□□□ 0.18
SNX13-207ENST00000475800 TRIM67Q6ZTA4 783 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 SPATA31D4Q6ZUB0 917 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 TTC39CQ8N584 583 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 KBTBD7Q8WVZ9 684 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 RTP3Q9BQQ7 232 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 DNAI2Q9GZS0 605 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 NIF3L1Q9GZT8 377 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 CYP3A43Q9HB55 503 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 CDH9Q9ULB4 789 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 NFE2L3Q9Y4A8 694 aa16.17■□□□□ 0.18
SNX13-207ENST00000475800 XYLBO75191 536 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 MTIF2P46199 727 aaKnown RBP16.16■□□□□ 0.18
SNX13-207ENST00000475800 MYL5Q02045 173 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 NHLH1Q02575 133 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 PLD1Q13393 1074 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 CBX2Q14781 532 aaPredicted RBP16.16■□□□□ 0.18
SNX13-207ENST00000475800 INTS6LQ5JSJ4 861 aaKnown RBP16.16■□□□□ 0.18
SNX13-207ENST00000475800 ATAT1Q5SQI0 421 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 RNF19BQ6ZMZ0 732 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 C11orf57Q6ZUT1 292 aaPredicted RBP16.16■□□□□ 0.18
SNX13-207ENST00000475800 GPR149Q86SP6 731 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 IRF2BP1Q8IU81 584 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 CREBRFQ8IUR6 639 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 OR6B3Q8NGW1 331 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 SLC7A14Q8TBB6 771 aa16.16■□□□□ 0.18
SNX13-207ENST00000475800 SPPL2BQ8TCT7 592 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms