RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ARHGAP18Q8N392 663 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 HES6Q96HZ4 224 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 WNK4Q96J92 1243 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 GPRC5CQ9NQ84 441 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 ALDH7A1P49419 539 aaKnown RBP11.44□□□□□ -0.58
VAPB-204ENST00000475243 SNX17Q15036 470 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 STX19Q8N4C7 294 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 ASCC2Q9H1I8 757 aaPredicted RBP11.44□□□□□ -0.58
VAPB-204ENST00000475243 DDX28Q9NUL7 540 aaKnown RBP11.44□□□□□ -0.58
VAPB-204ENST00000475243 DPP3Q9NY33 737 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 ALG6Q9Y672 507 aa11.44□□□□□ -0.58
VAPB-204ENST00000475243 LOC100653049A0A140TA62 436 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 TBC1D4O60343 1298 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 KRT34O76011 436 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 TFB1MQ8WVM0 346 aaKnown RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 SGF29Q96ES7 293 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 EPB41L4AQ9HCS5 686 aaPredicted RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 SLC25A13Q9UJS0 675 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 B3GAT3O94766 335 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 RHOBTB1O94844 696 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 VTNP04004 478 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 EPHB2P29323 1055 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 RFX3P48380 749 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 CASP4P49662 377 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 CPT1AP50416 773 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 KIF2BQ8N4N8 673 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 BLOC1S5Q8TDH9 187 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 SLITRK1Q96PX8 696 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 CCT8L2Q96SF2 557 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 PNKPQ96T60 521 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 ALDH8A1Q9H2A2 487 aaPredicted RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 KCTD10Q9H3F6 313 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 M0QYT0 321 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 KIAA0391O15091 583 aaKnown RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 HBP1O60381 514 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 CDH16O75309 829 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 IMPDH2P12268 514 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 CPA2P48052 419 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 PDK1Q15118 436 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 SBK1Q52WX2 424 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 FBXW10Q5XX13 1052 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 NCF1BA6NI72 391 aaPredicted RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 NCF1CA8MVU1 366 aaPredicted RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 CAMTA2O94983 1202 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 NCF1P14598 390 aaPredicted RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 PCYT1AP49585 367 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 RGS4P49798 205 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 STILQ15468 1287 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 CHI3L2Q15782 390 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 H2AFY2Q9P0M6 372 aaPredicted RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 PAK5Q9P286 719 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 SMG5Q9UPR3 1016 aaKnown RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 LRG1P02750 347 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 CARSP49589 748 aaKnown RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 SLC16A1P53985 500 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 TSGA10IPQ3SY00 556 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 TDRD10Q5VZ19 366 aaKnown RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 ADCK1Q86TW2 530 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 HORMAD1Q86X24 394 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 TMCO5AQ8N6Q1 288 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 ZNF669Q96BR6 464 aaPredicted RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 NUDT12Q9BQG2 462 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 AGTP01019 485 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 RBP3P10745 1247 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 SPRP35270 261 aaPredicted RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 ACADSBP45954 432 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 CDH18Q13634 790 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 RANBP17Q9H2T7 1088 aaKnown RBP11.43□□□□□ -0.58
VAPB-204ENST00000475243 TBX20Q9UMR3 447 aa11.43□□□□□ -0.58
VAPB-204ENST00000475243 PLEKP08567 350 aaPredicted RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 WEE1P30291 646 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 RFC5P40937 340 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 UGP2Q16851 508 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 RABL6Q3YEC7 729 aaPredicted RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 PLD3Q8IV08 490 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 SYTL2Q9HCH5 934 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 CLTCQ00610 1675 aaKnown RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 MED21Q13503 144 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 C1orf131Q8NDD1 294 aaKnown RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 CINPQ9BW66 212 aaPredicted RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 DDIT4Q9NX09 232 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 PSD3Q9NYI0 1048 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 USP15Q9Y4E8 981 aaPredicted RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 SPTLC1O15269 473 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 GUCA1CO95843 209 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 GYPCP04921 128 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 PGK2P07205 417 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 NEK2P51955 445 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 PLOD1Q02809 727 aaPredicted RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 FAM180AQ6UWF9 173 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 FAM151AQ8WW52 585 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 MTMR12Q9C0I1 747 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 CNTNAP5Q8WYK1 1306 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 TMEM120BA0PK00 339 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 SLC37A4O43826 429 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 CLEC16AQ2KHT3 1053 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 SLC44A2Q8IWA5 706 aaPredicted RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 PCYOX1LQ8NBM8 494 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 DIS3LQ8TF46 1054 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms