RNA–Protein interactions for RNA: ENST00000474707.1

RABGAP1-208, Transcript of RAB GTPase activating protein 1, human

TSL 3

Gene RABGAP1, Length 670 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RABGAP1-208	ENST00000474707	MARK4	Q96L34	752 aa		4.27	□□□□□ -1.73
RABGAP1-208	ENST00000474707	C5orf34	Q96MH7	638 aa		4.27	□□□□□ -1.73
RABGAP1-208	ENST00000474707	SLC2A13	Q96QE2	648 aa		4.27	□□□□□ -1.73
RABGAP1-208	ENST00000474707	SMOC2	Q9H3U7	446 aa		4.27	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PDGFC	Q9NRA1	345 aa		4.27	□□□□□ -1.73
RABGAP1-208	ENST00000474707	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.27	□□□□□ -1.73
RABGAP1-208	ENST00000474707	TDP1	Q9NUW8	608 aa		4.27	□□□□□ -1.73
RABGAP1-208	ENST00000474707	ETAA1	Q9NY74	926 aa		4.27	□□□□□ -1.73
RABGAP1-208	ENST00000474707	ZNF280A	P59817	542 aa	Predicted RBP	4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	RBM20	Q5T481	1227 aa	Known RBP	4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	SLC30A10	Q6XR72	485 aa		4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	IRF2BP2	Q7Z5L9	587 aa		4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	CHSY1	Q86X52	802 aa		4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	AOPEP	Q8N6M6	819 aa		4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	NRAC	Q8N912	160 aa		4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	ZC3H10	Q96K80	434 aa	Known RBP	4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	DLL3	Q9NYJ7	618 aa		4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.26	□□□□□ -1.73
RABGAP1-208	ENST00000474707	AGXT	P21549	392 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	FAP	Q12884	760 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	ZNF618	Q5T7W0	954 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	TEDDM1	Q5T9Z0	273 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	TAF2	Q6P1X5	1199 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PIGO	Q8TEQ8	1089 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	NSMCE1	Q8WV22	266 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	SCAMP4	Q969E2	229 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	FAM136A	Q96C01	138 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	AHCYL2	Q96HN2	611 aa	Known RBP	4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	MRGPRX4	Q96LA9	322 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	SERHL	Q9NQF3	203 aa		4.25	□□□□□ -1.73
RABGAP1-208	ENST00000474707	SGTA	O43765	313 aa		4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	BRINP1	O60477	761 aa		4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	ALDH9A1	P49189	494 aa		4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	EEFSEC	P57772	596 aa	Known RBP	4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	MIGA2	Q7L4E1	593 aa		4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	MRPL10	Q7Z7H8	261 aa	Known RBP	4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	NANOGP1	Q8N7R0	232 aa		4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PNLDC1	Q8NA58	520 aa	Known RBP	4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PSD4	Q8NDX1	1056 aa		4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PRSS3P2	Q8NHM4	247 aa		4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	VCPIP1	Q96JH7	1222 aa		4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	ASB2	Q96Q27	587 aa		4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PCDHA13	Q9Y5I0	950 aa		4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	MRPL42	Q9Y6G3	142 aa	Known RBP	4.24	□□□□□ -1.73
RABGAP1-208	ENST00000474707	WDR17	Q8IZU2	1322 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	FAM90A10P	A6NDY2	464 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	QSOX1	O00391	747 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	SOAT2	O75908	522 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PDHA1	P08559	390 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	CD6	P30203	668 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	CYP2C18	P33260	490 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	CYP4F2	P78329	520 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	TLE1	Q04724	770 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	RAB39A	Q14964	217 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	TWIST1	Q15672	202 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	VPS53	Q5VIR6	699 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	MIS18BP1	Q6P0N0	1132 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PDSS2	Q86YH6	399 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	UBR7	Q8N806	425 aa		4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	MRPS18A	Q9NVS2	196 aa	Known RBP	4.23	□□□□□ -1.73
RABGAP1-208	ENST00000474707	NOTCH4	Q99466	2003 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PPM1D	O15297	605 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PRKD3	O94806	890 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	FGB	P02675	491 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	ITGAL	P20701	1170 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	THBS3	P49746	956 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	HTRA4	P83105	476 aa	Predicted RBP	4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	HOXA4	Q00056	320 aa	Predicted RBP	4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	STAT4	Q14765	748 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PCID2	Q5JVF3	399 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	DTX2	Q86UW9	622 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	JAZF1	Q86VZ6	243 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	PPM1N	Q8N819	430 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	CYP2W1	Q8TAV3	490 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	COQ8B	Q96D53	544 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	RITA1	Q96K30	269 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	MACROD1	Q9BQ69	325 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	DUSP22	Q9NRW4	184 aa		4.22	□□□□□ -1.73
RABGAP1-208	ENST00000474707	IL6R	P08887	468 aa	Predicted RBP	4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	LIPA	P38571	399 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ERVK-21	P61565	698 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TMPRSS15	P98073	1019 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	SHC4	Q6S5L8	630 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	NAPRT	Q6XQN6	538 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	GADL1	Q6ZQY3	521 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	MAVS	Q7Z434	540 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	C16orf52	Q8NHV5	167 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	DMRTA2	Q96SC8	542 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CALCOCO1	Q9P1Z2	691 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	KLHL13	Q9P2N7	655 aa		4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	SAP30BP	Q9UHR5	308 aa	Known RBP	4.21	□□□□□ -1.74
RABGAP1-208	ENST00000474707	LY6G6E	A0A0G2JKS1	128 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	ZNF785	A8K8V0	405 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	OAZ2	O95190	189 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CHEK2	O96017	543 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	CHRM3	P20309	590 aa		4.2	□□□□□ -1.74
RABGAP1-208	ENST00000474707	TOB1	P50616	345 aa	Predicted RBP	4.2	□□□□□ -1.74

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