RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 ACBD6Q9BR61 282 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 SNX25Q9H3E2 840 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 TSPY26PQ9H489 355 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 PRDM6Q9NQX0 595 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 DZANK1Q9NVP4 752 aa16.84■□□□□ 0.29
COL1A1-204ENST00000474644 LIMA1Q9UHB6 759 aaKnown RBP16.84■□□□□ 0.29
COL1A1-204ENST00000474644 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.83■□□□□ 0.28
COL1A1-204ENST00000474644 GTPBP10A4D1E9 387 aaKnown RBP16.83■□□□□ 0.28
COL1A1-204ENST00000474644 REV3LO60673 3130 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 WEE2P0C1S8 567 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 PCSK1P29120 753 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 ZNF445P59923 1031 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 TSPY1Q01534 308 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 GPR17Q13304 367 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 CCDC142Q17RM4 750 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 SLC39A12Q504Y0 691 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 INTS6LQ5JSJ4 861 aaKnown RBP16.83■□□□□ 0.28
COL1A1-204ENST00000474644 TPGS2Q68CL5 300 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 ANKRD54Q6NXT1 300 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 RNF19BQ6ZMZ0 732 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 KREMEN2Q8NCW0 462 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 EHBP1Q8NDI1 1231 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 ANKRD20A12PQ8NF67 263 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 OR6B3Q8NGW1 331 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 ZNF461Q8TAF7 563 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 HLA-CQ95604 372 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 NT5C1BQ96P26 610 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 PKMYT1Q99640 499 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 SYT15Q9BQS2 421 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 CRACR2AQ9BSW2 395 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 CYP3A43Q9HB55 503 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 HMGXB4Q9UGU5 601 aa16.83■□□□□ 0.28
COL1A1-204ENST00000474644 AFF4Q9UHB7 1163 aaKnown RBP16.83■□□□□ 0.28
COL1A1-204ENST00000474644 MTMR11A4FU01 709 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 A8MXQ7 604 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 PES1O00541 588 aaKnown RBP16.82■□□□□ 0.28
COL1A1-204ENST00000474644 VNN2O95498 520 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 ATF2P15336 505 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 CDK11BP21127 795 aaKnown RBP16.82■□□□□ 0.28
COL1A1-204ENST00000474644 KCNA5P22460 613 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 GNL1P36915 607 aaPredicted RBP16.82■□□□□ 0.28
COL1A1-204ENST00000474644 COPB1P53618 953 aaKnown RBP16.82■□□□□ 0.28
COL1A1-204ENST00000474644 PSMC1P62191 440 aaKnown RBP16.82■□□□□ 0.28
COL1A1-204ENST00000474644 INCA1Q0VD86 236 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 CUL2Q13617 745 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 LIN9Q5TKA1 542 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 ELMSAN1Q6PJG2 1045 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 GBP6Q6ZN66 633 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 APTXQ7Z2E3 356 aaKnown RBP16.82■□□□□ 0.28
COL1A1-204ENST00000474644 LRRTM3Q86VH5 581 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 DCP1BQ8IZD4 617 aaKnown RBP16.82■□□□□ 0.28
COL1A1-204ENST00000474644 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 MSLNLQ96KJ4 702 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 PGLYRP2Q96PD5 576 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 COL25A1Q9BXS0 654 aaPredicted RBP16.82■□□□□ 0.28
COL1A1-204ENST00000474644 VPS16Q9H269 839 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 DPEP3Q9H4B8 488 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 PLEKHA4Q9H4M7 779 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 TMLHEQ9NVH6 421 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 DPP7Q9UHL4 492 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 CDH9Q9ULB4 789 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 COG5Q9UP83 839 aa16.82■□□□□ 0.28
COL1A1-204ENST00000474644 SPTBN5Q9NRC6 3674 aaKnown RBP16.82■□□□□ 0.28
COL1A1-204ENST00000474644 H3BQ06 376 aaPredicted RBP16.81■□□□□ 0.28
COL1A1-204ENST00000474644 ATP2C2O75185 946 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 SEC24AO95486 1093 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 C8AP07357 584 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 TPM2P07951 284 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 PDGFRBP09619 1106 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 CD58P19256 250 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 SLC9A1P19634 815 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 NDST1P52848 882 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 ADCY1Q08828 1119 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 EXOC3L4Q17RC7 722 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 SYCE2Q6PIF2 218 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 TRIM65Q6PJ69 517 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 ARHGEF19Q8IW93 802 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 SLC7A14Q8TBB6 771 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 CRISPLD1Q9H336 500 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 SFXN1Q9H9B4 322 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 CRTAC1Q9NQ79 661 aa16.81■□□□□ 0.28
COL1A1-204ENST00000474644 MYBPHLA2RUH7 354 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 SPDYE4A6NLX3 237 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 CILPO75339 1184 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 RFPL2O75678 378 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 ZMYND10O75800 440 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 TBXAS1P24557 533 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-204ENST00000474644 PON1P27169 355 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 CDR1P51861 262 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 TPM4P67936 248 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 APBA1Q02410 837 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 GCNT1Q02742 428 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 SMARCB1Q12824 385 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 ORC1Q13415 861 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 CLUL1Q15846 466 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 PHLDB3Q6NSJ2 640 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 FAM171BQ6P995 826 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 UNC93AQ86WB7 457 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 TCEAL8Q8IYN2 117 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 PPM1KQ8N3J5 372 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms