RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 LRRC3BQ96PB8 259 aa20■□□□□ 0.79
COL7A1-209ENST00000474432 PKMYT1Q99640 499 aa20■□□□□ 0.79
COL7A1-209ENST00000474432 OSBPL6Q9BZF3 934 aa20■□□□□ 0.79
COL7A1-209ENST00000474432 LTB4R2Q9NPC1 389 aa20■□□□□ 0.79
COL7A1-209ENST00000474432 GDAP2Q9NXN4 497 aa20■□□□□ 0.79
COL7A1-209ENST00000474432 HSPBP1Q9NZL4 362 aa20■□□□□ 0.79
COL7A1-209ENST00000474432 ITGA11Q9UKX5 1188 aa20■□□□□ 0.79
COL7A1-209ENST00000474432 GTF3C3Q9Y5Q9 886 aa20■□□□□ 0.79
COL7A1-209ENST00000474432 OBSL1O75147 1896 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 PRR23AA6NEV1 266 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 ARNTLO00327 626 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 HSP90AA1P07900 732 aaKnown RBP19.99■□□□□ 0.79
COL7A1-209ENST00000474432 PSMC3P17980 439 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 TARSP26639 723 aaKnown RBP19.99■□□□□ 0.79
COL7A1-209ENST00000474432 ME1P48163 572 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 TUFMP49411 452 aaKnown RBP19.99■□□□□ 0.79
COL7A1-209ENST00000474432 CUL4BQ13620 913 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 CCDC142Q17RM4 750 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 TPRG1Q6ZUI0 275 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 GRAMD1CQ8IYS0 662 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 NOC3LQ8WTT2 800 aaKnown RBP19.99■□□□□ 0.79
COL7A1-209ENST00000474432 SEPT5Q99719 369 aaPredicted RBP19.99■□□□□ 0.79
COL7A1-209ENST00000474432 TRMT61BQ9BVS5 477 aaKnown RBP19.99■□□□□ 0.79
COL7A1-209ENST00000474432 GPR88Q9GZN0 384 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 GZF1Q9H116 711 aaPredicted RBP19.99■□□□□ 0.79
COL7A1-209ENST00000474432 MAGEF1Q9HAY2 307 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 AGPAT3Q9NRZ7 376 aa19.99■□□□□ 0.79
COL7A1-209ENST00000474432 PTPRZ1P23471 2315 aaPredicted RBP19.99■□□□□ 0.79
COL7A1-209ENST00000474432 ZNF233A6NK53 670 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 FAM170BA6NMN3 283 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 HEPACAM2A8MVW5 462 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 GABRDO14764 452 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 HCRTO43612 131 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 SMARCB1Q12824 385 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 BFSP1Q12934 665 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 MGAT5BQ3V5L5 792 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 STXBP4Q6ZWJ1 553 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 TMEM150AQ86TG1 271 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 GPIHBP1Q8IV16 184 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 C1orf210Q8IVY1 113 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 MFSD6LQ8IWD5 586 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 SPPL2BQ8TCT7 592 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 C2orf15Q8WU43 125 aaKnown RBP19.98■□□□□ 0.79
COL7A1-209ENST00000474432 CLDN23Q96B33 292 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 TRPV5Q9NQA5 729 aa19.98■□□□□ 0.79
COL7A1-209ENST00000474432 ACTN4O43707 911 aaKnown RBP19.97■□□□□ 0.79
COL7A1-209ENST00000474432 KLRC4O43908 158 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 HMGA1P17096 107 aaKnown RBP19.97■□□□□ 0.79
COL7A1-209ENST00000474432 GABRR2P28476 465 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 GDI1P31150 447 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 AFMP43652 599 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 RBP5P82980 135 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 UBXN2BQ14CS0 331 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 BMT2Q1RMZ1 405 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 SOWAHAQ2M3V2 549 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 ARID3BQ8IVW6 561 aaPredicted RBP19.97■□□□□ 0.79
COL7A1-209ENST00000474432 NELFCDQ8IXH7 590 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 GIPC2Q8TF65 315 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 DEPDC1BQ8WUY9 529 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 ACBD6Q9BR61 282 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 BRD9Q9H8M2 597 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 DDX43Q9NXZ2 648 aaKnown RBP19.97■□□□□ 0.79
COL7A1-209ENST00000474432 ABI2Q9NYB9 513 aaPredicted RBP19.97■□□□□ 0.79
COL7A1-209ENST00000474432 FAM13BQ9NYF5 915 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 SERTAD1Q9UHV2 236 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 CFAP45Q9UL16 551 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 SNX9Q9Y5X1 595 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 GVINP1Q7Z2Y8 2422 aa19.97■□□□□ 0.79
COL7A1-209ENST00000474432 KIF26AQ9ULI4 1882 aaPredicted RBP19.96■□□□□ 0.79
COL7A1-209ENST00000474432 PVALEFA0A1B0GWK0 134 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 TULP1O00294 542 aaPredicted RBP19.96■□□□□ 0.79
COL7A1-209ENST00000474432 CLIC2O15247 247 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 KRT19P08727 400 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 TMEM191BP0C7N4 346 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 SP9P0CG40 484 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 ACAT1P24752 427 aaKnown RBP19.96■□□□□ 0.79
COL7A1-209ENST00000474432 GPR15P49685 360 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 FCHO2Q0JRZ9 810 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 INTS6LQ5JSJ4 861 aaKnown RBP19.96■□□□□ 0.79
COL7A1-209ENST00000474432 ITIH5Q86UX2 942 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 DCP1BQ8IZD4 617 aaKnown RBP19.96■□□□□ 0.79
COL7A1-209ENST00000474432 TMEM86AQ8N2M4 240 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 LEO1Q8WVC0 666 aaPredicted RBP19.96■□□□□ 0.79
COL7A1-209ENST00000474432 ATXN3LQ9H3M9 355 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 KIAA1586Q9HCI6 787 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 SLC39A2Q9NP94 309 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 PCDHB5Q9Y5E4 795 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 UBE4BO95155 1302 aa19.96■□□□□ 0.79
COL7A1-209ENST00000474432 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.95■□□□□ 0.78
COL7A1-209ENST00000474432 HUS1O60921 280 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 SLFN14P0C7P3 912 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 WEE1P30291 646 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 CYP4F8P98187 520 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 SNRNP35Q16560 246 aaKnown RBP19.95■□□□□ 0.78
COL7A1-209ENST00000474432 GPR158Q5T848 1215 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 WDR49Q8IV35 697 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 C12orf56Q8IXR9 622 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 TOP6BLQ8N6T0 577 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 RDH13Q8NBN7 331 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 STKLD1Q8NE28 680 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms