RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ZFP14Q9HCL3 533 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 CA14Q9ULX7 337 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 SNX9Q9Y5X1 595 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 SCN1AP35498 2009 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 TGFB1I1O43294 461 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 ECI2O75521 394 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 DLATP10515 647 aaKnown RBP20■□□□□ 0.79
CCDC171-206ENST00000474193 HOXD13P35453 343 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 PPP1R2P41236 205 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 BMT2Q1RMZ1 405 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 SLC5A9Q2M3M2 681 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 IER5LQ5T953 404 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 DPH6Q7L8W6 267 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 HS6ST3Q8IZP7 471 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 TRIML1Q8N9V2 468 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 BORCS6Q96GS4 357 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 GDAP2Q9NXN4 497 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 MAN1B1Q9UKM7 699 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 PCDHB5Q9Y5E4 795 aa20■□□□□ 0.79
CCDC171-206ENST00000474193 ZNF318Q5VUA4 2279 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 BIN1O00499 593 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 CEBPBP17676 345 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 AOC1P19801 751 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 PCSK1P29120 753 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 GPC5P78333 572 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 KLHL40Q2TBA0 621 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 ARHGAP15Q53QZ3 475 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 PRSS36Q5K4E3 855 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 LMBRD2Q68DH5 695 aaPredicted RBP19.99■□□□□ 0.79
CCDC171-206ENST00000474193 ISM2Q6H9L7 571 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 C12orf56Q8IXR9 622 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 TOP6BLQ8N6T0 577 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 KIAA0895Q8NCT3 520 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 ST13P5Q8NFI4 369 aaPredicted RBP19.99■□□□□ 0.79
CCDC171-206ENST00000474193 OR10T2Q8NGX3 314 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 E2F7Q96AV8 911 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 ELSPBP1Q96BH3 223 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 CCDC127Q96BQ5 260 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 HPDLQ96IR7 371 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 GCNAQ96QF7 691 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 TMEM209Q96SK2 561 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 KXD1Q9BQD3 176 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 ACBD6Q9BR61 282 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 ARHGEF3Q9NR81 526 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 DDX43Q9NXZ2 648 aaKnown RBP19.99■□□□□ 0.79
CCDC171-206ENST00000474193 MUC6Q6W4X9 2439 aa19.99■□□□□ 0.79
CCDC171-206ENST00000474193 PHACTR2O75167 634 aa19.98■□□□□ 0.79
CCDC171-206ENST00000474193 EPHA5P54756 1037 aa19.98■□□□□ 0.79
CCDC171-206ENST00000474193 WNT7BP56706 349 aa19.98■□□□□ 0.79
CCDC171-206ENST00000474193 TRPC3Q13507 836 aa19.98■□□□□ 0.79
CCDC171-206ENST00000474193 PSMD6Q15008 389 aa19.98■□□□□ 0.79
CCDC171-206ENST00000474193 CAVIN1Q6NZI2 390 aaKnown RBP19.98■□□□□ 0.79
CCDC171-206ENST00000474193 DNAJB7Q7Z6W7 309 aaPredicted RBP19.98■□□□□ 0.79
CCDC171-206ENST00000474193 GUF1Q8N442 669 aaKnown RBP19.98■□□□□ 0.79
CCDC171-206ENST00000474193 PDCL2Q8N4E4 241 aa19.98■□□□□ 0.79
CCDC171-206ENST00000474193 SMARCD2Q92925 531 aa19.98■□□□□ 0.79
CCDC171-206ENST00000474193 PSMG2Q969U7 264 aa19.98■□□□□ 0.79
CCDC171-206ENST00000474193 TCEAL4Q96EI5 215 aa19.98■□□□□ 0.79
CCDC171-206ENST00000474193 RPP25Q9BUL9 199 aaKnown RBP19.98■□□□□ 0.79
CCDC171-206ENST00000474193 ABI2Q9NYB9 513 aaPredicted RBP19.98■□□□□ 0.79
CCDC171-206ENST00000474193 MAPK8IP1Q9UQF2 711 aa19.98■□□□□ 0.79
CCDC171-206ENST00000474193 GALR2O43603 387 aaPredicted RBP19.97■□□□□ 0.79
CCDC171-206ENST00000474193 CLSTN1O94985 981 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 AP3M2P53677 418 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 NHLH1Q02575 133 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 CYP24A1Q07973 514 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 MORC3Q14149 939 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 NFKBIBQ15653 356 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 PHLDB3Q6NSJ2 640 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 TRAPPC11Q7Z392 1133 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 ADGRF2Q8IZF7 708 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 TMEM105Q8N8V8 129 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 MMS19Q96T76 1030 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 CGRRF1Q99675 332 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 ATXN3LQ9H3M9 355 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 L1RE1Q9UN81 338 aa19.97■□□□□ 0.79
CCDC171-206ENST00000474193 PDXKO00764 312 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 CALUO43852 315 aaPredicted RBP19.96■□□□□ 0.79
CCDC171-206ENST00000474193 LETM1O95202 739 aaPredicted RBP19.96■□□□□ 0.79
CCDC171-206ENST00000474193 VNN2O95498 520 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 RPL10AP62906 217 aaKnown RBP19.96■□□□□ 0.79
CCDC171-206ENST00000474193 PRKCQQ04759 706 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 SLC44A4Q53GD3 710 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 FAM78AQ5JUQ0 283 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 TANGO2Q6ICL3 276 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 SASS6Q6UVJ0 657 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 YAF2Q8IY57 180 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 SMYD4Q8IYR2 804 aaPredicted RBP19.96■□□□□ 0.79
CCDC171-206ENST00000474193 PRSS33Q8NF86 280 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 OR5B17Q8NGF7 314 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 ATOH1Q92858 354 aaPredicted RBP19.96■□□□□ 0.79
CCDC171-206ENST00000474193 TSG101Q99816 390 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 TRMT61BQ9BVS5 477 aaKnown RBP19.96■□□□□ 0.79
CCDC171-206ENST00000474193 CRISPLD1Q9H336 500 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 BRD9Q9H8M2 597 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 TBC1D17Q9HA65 648 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 SIX4Q9UIU6 781 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 ZMYM5Q9UJ78 669 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 NOTCH4Q99466 2003 aa19.96■□□□□ 0.79
CCDC171-206ENST00000474193 A0A1W2PRU2 124 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms