RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 NOMO3P69849 1222 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 CLDN10P78369 228 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 PLCB3Q01970 1234 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 AP1B1Q10567 949 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 MAMLD1Q13495 774 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 PKN2Q16513 984 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 RNASEH2BQ5TBB1 312 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 TMEM154Q6P9G4 183 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 DCUN1D2Q6PH85 259 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SPOCD1Q6ZMY3 1216 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 OTOAQ7RTW8 1153 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 NIPA2Q8N8Q9 360 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 KCNV2Q8TDN2 545 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 TEKT4Q8WW24 435 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 RSAD2Q8WXG1 361 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SLC7A6OSQ96CW6 309 aaPredicted RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 MASTLQ96GX5 879 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 ZNF333Q96JL9 665 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 HEMGNQ9BXL5 484 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 TRIM4Q9C037 500 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 WWP1Q9H0M0 922 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 DNAJC17Q9NVM6 304 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 AGTPBP1Q9UPW5 1226 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 PCDHB4Q9Y5E5 795 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SIPA1L1O43166 1804 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 GOLGA8IPA6NC78 632 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 GOLGA8JA6NMD2 632 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 FKBP6O75344 327 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 INHBAP08476 426 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 ATF7P17544 494 aaPredicted RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 KRT4P19013 534 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 TNNI1P19237 187 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 EPHB2P29323 1055 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 ADSSP30520 456 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 RPA3P35244 121 aaPredicted RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 NPTX2P47972 431 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 XIAPP98170 497 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 CUL2Q13617 745 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 ANO7Q6IWH7 933 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 LRRC74BQ6ZQY2 392 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 TMPRSS6Q8IU80 811 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 NLGN1Q8N2Q7 840 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 GALNT15Q8N3T1 639 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 UTP4Q969X6 686 aaKnown RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 APOPT1Q96IL0 206 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 C11orf70Q9BRQ4 267 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 CENPKQ9BS16 269 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 FAM167BQ9BTA0 163 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 MIS12Q9H081 205 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 STN1Q9H668 368 aaKnown RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 GPAMQ9HCL2 828 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 NPHS2Q9NP85 383 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 KCNK4Q9NYG8 393 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 NDUFA13Q9P0J0 144 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 WDR35Q9P2L0 1181 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 DDX39AO00148 427 aaKnown RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 POLRMTO00411 1230 aaKnown RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 LPXNO60711 386 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 FAM155BO75949 473 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 KRT37O76014 449 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 PSMG1O95456 288 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 ACAP1Q15027 740 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 DOK7Q18PE1 504 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 ZACNQ401N2 412 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 MAP3K21Q5TCX8 1036 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 SNX30Q5VWJ9 437 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 CWF19L1Q69YN2 538 aaKnown RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 C15orf39Q6ZRI6 1047 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 MAEAQ7L5Y9 396 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 NET1Q7Z628 596 aaPredicted RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 PDCD7Q8N8D1 485 aaKnown RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 PLEKHO2Q8TD55 490 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 CPA5Q8WXQ8 436 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 MTBPQ96DY7 904 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 NGLY1Q96IV0 654 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 DENND2DQ9H6A0 471 aaPredicted RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 WRAP73Q9P2S5 460 aaPredicted RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 TRIM33Q9UPN9 1127 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 CNTN6Q9UQ52 1028 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 USTQ9Y2C2 406 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 R3HDM2Q9Y2K5 976 aaKnown RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 E7ESA3 106 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 ZBTB39O15060 712 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 MED7O43513 233 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 TBC1D12O60347 775 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 STAM2O75886 525 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 HLA-DRAP01903 254 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 CETPP11597 493 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 RAP1GDS1P52306 607 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 GRM1Q13255 1194 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 CCDC142Q17RM4 750 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 AAGABQ6PD74 315 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 MTDHQ86UE4 582 aaKnown RBP6.43□□□□□ -1.38
HERC4-209ENST00000473533 C4orf33Q8N1A6 199 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.43□□□□□ -1.38
HERC4-209ENST00000473533 LPAR1Q92633 364 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 GPRASP2Q96D09 838 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 PAFAH2Q99487 392 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 DHRS4Q9BTZ2 278 aa6.43□□□□□ -1.38
HERC4-209ENST00000473533 IKZF4Q9H2S9 585 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms