RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 LHX1P48742 406 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 EPHA5P54756 1037 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 VCPP55072 806 aaKnown RBP16.74■□□□□ 0.27
MRPL55-226ENST00000473066 TNNC1P63316 161 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 BIRC3Q13489 604 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 TRAPPC11Q7Z392 1133 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 TTC9BQ8N6N2 239 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 GPR152Q8TDT2 470 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 TCEAL4Q96EI5 215 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 RTP3Q9BQQ7 232 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 CRISPLD1Q9H336 500 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 SLC2A4RGQ9NR83 387 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 PTPRDP23468 1912 aa16.74■□□□□ 0.27
MRPL55-226ENST00000473066 MYH10P35580 1976 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 ECI2O75521 394 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 SOAT2O75908 522 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 NR3C1P04150 777 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 AP3M2P53677 418 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 PFKPQ01813 784 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 DPYDQ12882 1025 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 ARHGAP15Q53QZ3 475 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 INTS6LQ5JSJ4 861 aaKnown RBP16.73■□□□□ 0.27
MRPL55-226ENST00000473066 ASTLQ6HA08 431 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-226ENST00000473066 DPH6Q7L8W6 267 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 CXorf38Q8TB03 319 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 PSMG2Q969U7 264 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 MMS19Q96T76 1030 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 ACBD6Q9BR61 282 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 GPR88Q9GZN0 384 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 ZFP14Q9HCL3 533 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 ARHGEF3Q9NR81 526 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 HOOK1Q9UJC3 728 aaKnown RBP16.73■□□□□ 0.27
MRPL55-226ENST00000473066 FRMD4BQ9Y2L6 1034 aa16.73■□□□□ 0.27
MRPL55-226ENST00000473066 TICRRQ7Z2Z1 1910 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 ACAT1P24752 427 aaKnown RBP16.72■□□□□ 0.27
MRPL55-226ENST00000473066 CCR2P41597 374 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 CLCN5P51795 746 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 NUBP1P53384 320 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 PTPN5P54829 565 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 KCNB1Q14721 858 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 TEAD2Q15562 447 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 CEP135Q66GS9 1140 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 SPATA2LQ8IUW3 424 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-226ENST00000473066 SLC9A9Q8IVB4 645 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 SYAP1Q96A49 352 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-226ENST00000473066 ELSPBP1Q96BH3 223 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 SHDQ96IW2 340 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 DNAJC25Q9H1X3 360 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 KCTD10Q9H3F6 313 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 RMND1Q9NWS8 449 aa16.72■□□□□ 0.27
MRPL55-226ENST00000473066 TRIOO75962 3097 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 A0A1W2PRU2 124 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 HAPLN1P10915 354 aaPredicted RBP16.71■□□□□ 0.27
MRPL55-226ENST00000473066 GJA1P17302 382 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 GABRR2P28476 465 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 CDC25CP30307 473 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 CDR1P51861 262 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 RPL10AP62906 217 aaKnown RBP16.71■□□□□ 0.27
MRPL55-226ENST00000473066 FAM160A1Q05DH4 1040 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 MAPRE1Q15691 268 aaKnown RBP16.71■□□□□ 0.27
MRPL55-226ENST00000473066 C4orf50Q6ZRC1 276 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 DNAJB7Q7Z6W7 309 aaPredicted RBP16.71■□□□□ 0.27
MRPL55-226ENST00000473066 TMC8Q8IU68 726 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 SHKBP1Q8TBC3 707 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 SMARCD2Q92925 531 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 ASB16Q96NS5 453 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 LPIN3Q9BQK8 851 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 SYT15Q9BQS2 421 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 PI4K2AQ9BTU6 479 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 RPP25Q9BUL9 199 aaKnown RBP16.71■□□□□ 0.27
MRPL55-226ENST00000473066 SNX25Q9H3E2 840 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 ATXN3LQ9H3M9 355 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 ABCB6Q9NP58 842 aa16.71■□□□□ 0.27
MRPL55-226ENST00000473066 GREB1Q4ZG55 1949 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 SMC2O95347 1197 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 ATF6P18850 670 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 AOC1P19801 751 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 NR2F2P24468 414 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 RPL13P26373 211 aaKnown RBP16.7■□□□□ 0.26
MRPL55-226ENST00000473066 ATICP31939 592 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 GPC5P78333 572 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 SNW1Q13573 536 aaKnown RBP16.7■□□□□ 0.26
MRPL55-226ENST00000473066 SOWAHAQ2M3V2 549 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 ZNF699Q32M78 642 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 FAM78AQ5JUQ0 283 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 CWF19L1Q69YN2 538 aaKnown RBP16.7■□□□□ 0.26
MRPL55-226ENST00000473066 LRRTM3Q86VH5 581 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 OSTM1Q86WC4 334 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 GUF1Q8N442 669 aaKnown RBP16.7■□□□□ 0.26
MRPL55-226ENST00000473066 TMEM105Q8N8V8 129 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 ZSCAN18Q8TBC5 510 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-226ENST00000473066 GIPC2Q8TF65 315 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 IRF2BPLQ9H1B7 796 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 TBC1D17Q9HA65 648 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 DMAC2Q9NW81 257 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 CDH9Q9ULB4 789 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-226ENST00000473066 MAPK8IP1Q9UQF2 711 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 TRAF3IP3Q9Y228 551 aa16.7■□□□□ 0.26
MRPL55-226ENST00000473066 KRBA1A5PL33 1030 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms