RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 ACAT1P24752 427 aaKnown RBP13.17□□□□□ -0.3
PRKCB-205ENST00000472066 PCSK1P29120 753 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 LTBRP36941 435 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 COPB1P53618 953 aaKnown RBP13.17□□□□□ -0.3
PRKCB-205ENST00000472066 TSPY1Q01534 308 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 DLX2Q07687 328 aaPredicted RBP13.17□□□□□ -0.3
PRKCB-205ENST00000472066 EXOC3L4Q17RC7 722 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 SLC39A12Q504Y0 691 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 INTS6LQ5JSJ4 861 aaKnown RBP13.17□□□□□ -0.3
PRKCB-205ENST00000472066 APTXQ7Z2E3 356 aaKnown RBP13.17□□□□□ -0.3
PRKCB-205ENST00000472066 LRRTM3Q86VH5 581 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 DCP1BQ8IZD4 617 aaKnown RBP13.17□□□□□ -0.3
PRKCB-205ENST00000472066 KREMEN2Q8NCW0 462 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 HDAC7Q8WUI4 952 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 HLA-CQ95604 372 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 PLEKHA4Q9H4M7 779 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 AFF4Q9UHB7 1163 aaKnown RBP13.17□□□□□ -0.3
PRKCB-205ENST00000472066 DPP7Q9UHL4 492 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 CDH9Q9ULB4 789 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 NME7Q9Y5B8 376 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 XIRP2A4UGR9 3374 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 ATP2C2O75185 946 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 SRGAP2BP0DMP2 458 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 CD58P19256 250 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 PON1P27169 355 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 TPM4P67936 248 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 KCNMA1Q12791 1236 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 CUL2Q13617 745 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 PHLDB3Q6NSJ2 640 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 ANKRD54Q6NXT1 300 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 FAM171BQ6P995 826 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 TRIM65Q6PJ69 517 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 ARHGEF19Q8IW93 802 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 PGLYRP2Q96PD5 576 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 PKMYT1Q99640 499 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 ARID3AQ99856 593 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 DPEP3Q9H4B8 488 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 UBE2ZQ9H832 354 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-205ENST00000472066 MAN1C1Q9NR34 630 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 TMLHEQ9NVH6 421 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 DZANK1Q9NVP4 752 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 GCNT4Q9P109 453 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 GTF3C4Q9UKN8 822 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 MAFFQ9ULX9 164 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 BARX2Q9UMQ3 279 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-205ENST00000472066 COG5Q9UP83 839 aa13.16□□□□□ -0.3
PRKCB-205ENST00000472066 SCN1AP35498 2009 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 MYBPHLA2RUH7 354 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 GOLGA6L19H0YKK7 550 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 TBX10O75333 385 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 SEC24AO95486 1093 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 VNN2O95498 520 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 HOXB8P17481 243 aaPredicted RBP13.15□□□□□ -0.3
PRKCB-205ENST00000472066 PTPN1P18031 435 aaKnown RBP13.15□□□□□ -0.3
PRKCB-205ENST00000472066 TBXAS1P24557 533 aaPredicted RBP13.15□□□□□ -0.3
PRKCB-205ENST00000472066 ELF1P32519 619 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 CDR1P51861 262 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 NDST1P52848 882 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 PSMC1P62191 440 aaKnown RBP13.15□□□□□ -0.3
PRKCB-205ENST00000472066 ADCY1Q08828 1119 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 INCA1Q0VD86 236 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 SMARCB1Q12824 385 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 UVSSAQ2YD98 709 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 FKBP15Q5T1M5 1219 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 SYCE2Q6PIF2 218 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 ELMSAN1Q6PJG2 1045 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 RRAGAQ7L523 313 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 UNC93AQ86WB7 457 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 TCEAL8Q8IYN2 117 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 PPM1KQ8N3J5 372 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 TTC39CQ8N584 583 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 ATAD1Q8NBU5 361 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 WHAMMQ8TF30 809 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 MSLNLQ96KJ4 702 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 LPIN3Q9BQK8 851 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 SYT15Q9BQS2 421 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 FAM124BQ9H5Z6 455 aaPredicted RBP13.15□□□□□ -0.3
PRKCB-205ENST00000472066 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 UBE2TQ9NPD8 197 aaPredicted RBP13.15□□□□□ -0.3
PRKCB-205ENST00000472066 CRTAC1Q9NQ79 661 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 PRDM6Q9NQX0 595 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 CISHQ9NSE2 258 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 HMGXB4Q9UGU5 601 aa13.15□□□□□ -0.3
PRKCB-205ENST00000472066 MTMR11A4FU01 709 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 LGALS16A8MUM7 142 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 PRRG1O14668 218 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 CILPO75339 1184 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 ZMYND10O75800 440 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 C8AP07357 584 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 KCNA5P22460 613 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 APBA1Q02410 837 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 GCNT1Q02742 428 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 DUSP4Q13115 394 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 ORC1Q13415 861 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 NFE2Q16621 373 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-205ENST00000472066 CCDC142Q17RM4 750 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 DPY19L2P1Q6NXN4 242 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 GJB7Q6PEY0 223 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms