RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 FANCD2OSQ96PS1 177 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 RMDN3Q96TC7 470 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 ADAMTS10Q9H324 1103 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 C7orf69Q9H7B7 122 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 RGS18Q9NS28 235 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.93□□□□□ -1.62
LMNB1-205ENST00000472034 SUN2Q9UH99 717 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 GGT7Q9UJ14 662 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 TUBE1Q9UJT0 475 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 PNMA2Q9UL42 364 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 PCDHGA5Q9Y5G8 931 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 TRPV2Q9Y5S1 764 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 ABCA7Q8IZY2 2146 aa4.93□□□□□ -1.62
LMNB1-205ENST00000472034 COL4A2P08572 1712 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 ITPR2Q14571 2701 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 USP9YO00507 2555 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 AHCTF1Q8WYP5 2266 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 HMX2A2RU54 273 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 CCDC66A2RUB6 948 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 DENND3A2RUS2 1198 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 MBLAC1A4D2B0 266 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 FANCGO15287 622 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 EXTL3O43909 919 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 ADAM23O75077 832 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 STK10O94804 968 aaKnown RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 IGLV1-40P01703 118 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 NFICP08651 508 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 MYCLP12524 364 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 GP1BBP13224 206 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 FSTP19883 344 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 MAN1A1P33908 653 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 ZNF76P36508 570 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 TRPC1P48995 793 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 IRX4P78413 519 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 FAM189BP81408 668 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 SARNPP82979 210 aaKnown RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PFKPQ01813 784 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PPFIA1Q13136 1202 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PLK5Q496M5 336 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 FILIP1LQ4L180 1135 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PRSS36Q5K4E3 855 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 CDPF1Q6NVV7 123 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PKN3Q6P5Z2 889 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 CCDC73Q6ZRK6 1079 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 OTUD6AQ7L8S5 288 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 GRASPQ7Z6J2 395 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 RSPH3Q86UC2 560 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PPFIBP1Q86W92 1011 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 SMYD4Q8IYR2 804 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 SPEM1Q8N4L4 309 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 SAMD3Q8N6K7 520 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 RNF214Q8ND24 703 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 NSUN6Q8TEA1 469 aaKnown RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 TRAPPC12Q8WVT3 735 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 SSH1Q8WYL5 1049 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 EZH1Q92800 747 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 FGF13Q92913 245 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 EAF2Q96CJ1 260 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 TMEM169Q96HH4 297 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 TMEM74Q96NL1 305 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 CAMK1GQ96NX5 476 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 FCRL3Q96P31 734 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PPP1R16BQ96T49 567 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PHF20Q9BVI0 1012 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 BACH2Q9BYV9 841 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 BRINP2Q9C0B6 783 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 NT5C3AQ9H0P0 336 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 DUSP15Q9H1R2 295 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 CPVLQ9H3G5 476 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 GSX1Q9H4S2 264 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 MLXIPQ9HAP2 919 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 IFT122Q9HBG6 1241 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 FSCN3Q9NQT6 498 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 METTL5Q9NRN9 209 aaKnown RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 FAM105AQ9NUU6 356 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 TMEM161AQ9NX61 479 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 HSPBP1Q9NZL4 362 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 FBXO9Q9UK97 447 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PCOLCE2Q9UKZ9 415 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 CDH7Q9ULB5 785 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 GINS2Q9Y248 185 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 MRPS17Q9Y2R5 130 aaKnown RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 SLC4A4Q9Y6R1 1079 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PTPRBP23467 1997 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 NUP205Q92621 2012 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 NOTCH4Q99466 2003 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 PTPRCP08575 1304 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 CCDC171Q6TFL3 1326 aa4.92□□□□□ -1.62
LMNB1-205ENST00000472034 GOLGA4Q13439 2230 aaKnown RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 KIF26AQ9ULI4 1882 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-205ENST00000472034 LRBAP50851 2863 aa4.91□□□□□ -1.62
LMNB1-205ENST00000472034 MUC22E2RYF6 1773 aaPredicted RBP4.91□□□□□ -1.62
LMNB1-205ENST00000472034 BCLAF3A2AJT9 711 aaKnown RBP4.91□□□□□ -1.62
LMNB1-205ENST00000472034 B4DLN1 442 aa4.91□□□□□ -1.62
LMNB1-205ENST00000472034 B4E1Z4 1266 aa4.91□□□□□ -1.62
LMNB1-205ENST00000472034 B8ZZF3 427 aa4.91□□□□□ -1.62
LMNB1-205ENST00000472034 SCAMP3O14828 347 aaKnown RBP4.91□□□□□ -1.62
LMNB1-205ENST00000472034 TEX28O15482 410 aa4.91□□□□□ -1.62
LMNB1-205ENST00000472034 ZC3H11AO75152 810 aaKnown RBP eCLIP4.91□□□□□ -1.62
LMNB1-205ENST00000472034 CFBP00751 764 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms