RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 RECQLP46063 649 aaPredicted RBP6.1□□□□□ -1.43
CD46-213ENST00000471987 NOGQ13253 232 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 EPHA10Q5JZY3 1008 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 TNPO1Q92973 898 aaKnown RBP6.1□□□□□ -1.43
CD46-213ENST00000471987 RGMAQ96B86 450 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 FAM136AQ96C01 138 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 SERTAD4Q9NUC0 356 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 RNF7Q9UBF6 113 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 ABCF2Q9UG63 623 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 AGAP1Q9UPQ3 857 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 NXPH3O95157 252 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 CHRM3P20309 590 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 HK3P52790 923 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 EVA1CP58658 441 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 SLC10A2Q12908 348 aaPredicted RBP6.09□□□□□ -1.43
CD46-213ENST00000471987 TBCCQ15814 346 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 TEDDM1Q5T9Z0 273 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 ZNF551Q7Z340 670 aaPredicted RBP6.09□□□□□ -1.43
CD46-213ENST00000471987 HEATR3Q7Z4Q2 680 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 PPP1R32Q7Z5V6 425 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 USP37Q86T82 979 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 FAM109AQ8N4B1 249 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 SEMA6DQ8NFY4 1073 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 ATRIPQ8WXE1 791 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 DDB2Q92466 427 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 NELL2Q99435 816 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 C1QTNF7Q9BXJ2 289 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 MRPS18AQ9NVS2 196 aaKnown RBP6.09□□□□□ -1.43
CD46-213ENST00000471987 FLRT1Q9NZU1 646 aa6.09□□□□□ -1.43
CD46-213ENST00000471987 CADPSQ9ULU8 1353 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 LINC01548A6NM66 108 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 SNUPNO95149 360 aaKnown RBP6.08□□□□□ -1.44
CD46-213ENST00000471987 FTLP02792 175 aaPredicted RBP6.08□□□□□ -1.44
CD46-213ENST00000471987 HNRNPCP07910 306 aaKnown RBP eCLIP6.08□□□□□ -1.44
CD46-213ENST00000471987 NDUFB7P17568 137 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 GCLCP48506 637 aaPredicted RBP6.08□□□□□ -1.44
CD46-213ENST00000471987 ZNF81P51508 661 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 LLGL1Q15334 1064 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 EZH2Q15910 746 aaKnown RBP6.08□□□□□ -1.44
CD46-213ENST00000471987 SRSF7Q16629 238 aaKnown RBP eCLIP6.08□□□□□ -1.44
CD46-213ENST00000471987 C1QL2Q7Z5L3 287 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 PRR18Q8N4B5 295 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 CPA6Q8N4T0 437 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 SCARB1Q8WTV0 552 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 FAM167AQ96KS9 214 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 SMAD5Q99717 465 aaKnown RBP6.08□□□□□ -1.44
CD46-213ENST00000471987 MRPL46Q9H2W6 279 aaKnown RBP6.08□□□□□ -1.44
CD46-213ENST00000471987 ARHGEF3Q9NR81 526 aa6.08□□□□□ -1.44
CD46-213ENST00000471987 SETD1BQ9UPS6 1966 aaKnown RBP6.07□□□□□ -1.44
CD46-213ENST00000471987 TOB1P50616 345 aaPredicted RBP6.07□□□□□ -1.44
CD46-213ENST00000471987 GRM1Q13255 1194 aa6.07□□□□□ -1.44
CD46-213ENST00000471987 ZNF618Q5T7W0 954 aa6.07□□□□□ -1.44
CD46-213ENST00000471987 USP45Q70EL2 814 aa6.07□□□□□ -1.44
CD46-213ENST00000471987 KLHDC4Q8TBB5 520 aa6.07□□□□□ -1.44
CD46-213ENST00000471987 ASPSCR1Q9BZE9 553 aa6.07□□□□□ -1.44
CD46-213ENST00000471987 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.07□□□□□ -1.44
CD46-213ENST00000471987 LMBRD1Q9NUN5 540 aa6.07□□□□□ -1.44
CD46-213ENST00000471987 DKK3Q9UBP4 350 aa6.07□□□□□ -1.44
CD46-213ENST00000471987 ZNF70Q9UC06 446 aaPredicted RBP6.07□□□□□ -1.44
CD46-213ENST00000471987 TARM1B6A8C7 271 aa6.06□□□□□ -1.44
CD46-213ENST00000471987 M0QYG6 137 aa6.06□□□□□ -1.44
CD46-213ENST00000471987 ALDH9A1P49189 494 aa6.06□□□□□ -1.44
CD46-213ENST00000471987 TFF2Q03403 129 aa6.06□□□□□ -1.44
CD46-213ENST00000471987 TMEM240Q5SV17 173 aa6.06□□□□□ -1.44
CD46-213ENST00000471987 VPS53Q5VIR6 699 aa6.06□□□□□ -1.44
CD46-213ENST00000471987 FAM160B1Q5W0V3 765 aa6.06□□□□□ -1.44
CD46-213ENST00000471987 SFRP4Q6FHJ7 346 aaPredicted RBP6.06□□□□□ -1.44
CD46-213ENST00000471987 CEP85Q6P2H3 762 aa6.06□□□□□ -1.44
CD46-213ENST00000471987 ZNF778Q96MU6 729 aa6.06□□□□□ -1.44
CD46-213ENST00000471987 PUS7Q96PZ0 661 aaKnown RBP6.06□□□□□ -1.44
CD46-213ENST00000471987 WDR91A4D1P6 747 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 ERBB2P04626 1255 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 FAM163BP0C2L3 166 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 TYRP14679 529 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 PCSK6P29122 969 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 MAP2K6P52564 334 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 EIF2B5Q13144 721 aaKnown RBP6.05□□□□□ -1.44
CD46-213ENST00000471987 ANKRD16Q6P6B7 361 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 TMEM108Q6UXF1 575 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 DTX2Q86UW9 622 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 PPP1R3BQ86XI6 285 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 TBC1D5Q92609 795 aa6.05□□□□□ -1.44
CD46-213ENST00000471987 PPM1DO15297 605 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 TLR5O60602 858 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 JTBO76095 146 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 POU2F2P09086 479 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 PGS1Q32NB8 556 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 TMEM119Q4V9L6 283 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 ICE2Q659A1 982 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 SLC29A4Q7RTT9 530 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 VGLL2Q8N8G2 317 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 FAM46DQ8NEK8 389 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 SEMA4CQ9C0C4 833 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 SERHLQ9NQF3 203 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 PNPOQ9NVS9 261 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 SERGEFQ9UGK8 458 aa6.04□□□□□ -1.44
CD46-213ENST00000471987 ZNF804BA4D1E1 1349 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 IL33O95760 270 aa6.03□□□□□ -1.44
CD46-213ENST00000471987 AHSGP02765 367 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms