RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 ATPAF2Q8N5M1 289 aa13.54□□□□□ -0.24
PCCB-210ENST00000471595 EIF1ADQ8N9N8 165 aaKnown RBP13.54□□□□□ -0.24
PCCB-210ENST00000471595 HPDLQ96IR7 371 aa13.54□□□□□ -0.24
PCCB-210ENST00000471595 CGRRF1Q99675 332 aa13.54□□□□□ -0.24
PCCB-210ENST00000471595 MARCOQ9UEW3 520 aaPredicted RBP13.54□□□□□ -0.24
PCCB-210ENST00000471595 KIAA1257Q9ULG3 409 aa13.54□□□□□ -0.24
PCCB-210ENST00000471595 TMX2Q9Y320 296 aa13.54□□□□□ -0.24
PCCB-210ENST00000471595 LSM8O95777 96 aaKnown RBP13.54□□□□□ -0.24
PCCB-210ENST00000471595 CYP4A22Q5TCH4 519 aa13.54□□□□□ -0.24
PCCB-210ENST00000471595 PCNX4Q63HM2 1172 aa13.54□□□□□ -0.24
PCCB-210ENST00000471595 VGLL2Q8N8G2 317 aa13.54□□□□□ -0.24
PCCB-210ENST00000471595 PDCD6IPQ8WUM4 868 aaKnown RBP13.54□□□□□ -0.24
PCCB-210ENST00000471595 ATG4CQ96DT6 458 aa13.54□□□□□ -0.24
PCCB-210ENST00000471595 GDF3Q9NR23 364 aa13.54□□□□□ -0.24
PCCB-210ENST00000471595 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCCB-210ENST00000471595 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
PCCB-210ENST00000471595 EFCAB12Q6NXP0 572 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 PTPRN2Q92932 1015 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 MYOZ2Q9NPC6 264 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 HACD3Q9P035 362 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 UBA6A0AVT1 1052 aaPredicted RBP13.53□□□□□ -0.24
PCCB-210ENST00000471595 ANGPT2O15123 496 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 SMAD1Q15797 465 aaKnown RBP13.53□□□□□ -0.24
PCCB-210ENST00000471595 CLEC16AQ2KHT3 1053 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 SPDYCQ5MJ68 293 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 CCNJLQ8IV13 435 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 CALML6Q8TD86 181 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 SNX19Q92543 992 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 GFM2Q969S9 779 aaKnown RBP13.53□□□□□ -0.24
PCCB-210ENST00000471595 KLF6Q99612 283 aaPredicted RBP13.53□□□□□ -0.24
PCCB-210ENST00000471595 TLR10Q9BXR5 811 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 TASP1Q9H6P5 420 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 TMEM247A6NEH6 219 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 RECQLP46063 649 aaPredicted RBP13.53□□□□□ -0.24
PCCB-210ENST00000471595 CHI3L2Q15782 390 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 CXorf56Q9H5V9 222 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCCB-210ENST00000471595 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 CDYLQ9Y232 598 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 GHRP10912 638 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 CYP24A1Q07973 514 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 ATG4AQ8WYN0 398 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 DACT3Q96B18 629 aaPredicted RBP13.53□□□□□ -0.24
PCCB-210ENST00000471595 SLC38A7Q9NVC3 462 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 ARHGEF38Q9NXL2 777 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 TRIM49D1C9J1S8 452 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 TMCC1O94876 653 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 PDK2Q15119 407 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 RBBP7Q16576 425 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 PRPF39Q86UA1 669 aaKnown RBP13.53□□□□□ -0.24
PCCB-210ENST00000471595 TXNRD3Q86VQ6 643 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 ASPSCR1Q9BZE9 553 aa13.53□□□□□ -0.24
PCCB-210ENST00000471595 GRAP2O75791 330 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 VHLP40337 213 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 NFIAQ12857 509 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 APLFQ8IW19 511 aaPredicted RBP13.52□□□□□ -0.24
PCCB-210ENST00000471595 PARD3BQ8TEW8 1205 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 CEP19Q96LK0 163 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 SARS2Q9NP81 518 aaKnown RBP13.52□□□□□ -0.24
PCCB-210ENST00000471595 APOA4P06727 396 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 KCNA3P22001 575 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 PNPLA4P41247 253 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 HDAC4P56524 1084 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 CAPRIN1Q14444 709 aaKnown RBP13.52□□□□□ -0.24
PCCB-210ENST00000471595 GRAMD4Q6IC98 578 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 LRRC6Q86X45 466 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 SPATA2LQ8IUW3 424 aaPredicted RBP13.52□□□□□ -0.24
PCCB-210ENST00000471595 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.24
PCCB-210ENST00000471595 UBA3Q8TBC4 463 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 EGFL8Q99944 293 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 KATNAL1Q9BW62 490 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 GPRC5CQ9NQ84 441 aa13.52□□□□□ -0.24
PCCB-210ENST00000471595 ZBBXA8MT70 800 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 MAP2K7O14733 419 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 ZBTB22O15209 634 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 TMEM259Q4ZIN3 620 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 SCFD2Q8WU76 684 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 C20orf96Q9NUD7 363 aaPredicted RBP13.52□□□□□ -0.25
PCCB-210ENST00000471595 SASH3O75995 380 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 GFAPP14136 432 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 C16orf87Q6PH81 154 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 ZNF662Q6ZS27 426 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 CREG2Q8IUH2 290 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 ACER1Q8TDN7 264 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 SLC20A1Q8WUM9 679 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 TFB1MQ8WVM0 346 aaKnown RBP13.52□□□□□ -0.25
PCCB-210ENST00000471595 SH3GL3Q99963 347 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 TRIM54Q9BYV2 358 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 ELP3Q9H9T3 547 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 BLOC1S4Q9NUP1 217 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 SLC13A4Q9UKG4 626 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 ARHGAP26Q9UNA1 814 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 KRT16P08779 473 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 HADHAP40939 763 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 DCAF4L1Q3SXM0 396 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 ELMO2Q96JJ3 720 aa13.52□□□□□ -0.25
PCCB-210ENST00000471595 EIF4E1BA6NMX2 242 aaKnown RBP13.51□□□□□ -0.25
PCCB-210ENST00000471595 SUPT20HL2P0C7V6 817 aa13.51□□□□□ -0.25
PCCB-210ENST00000471595 RNF219Q5W0B1 726 aaPredicted RBP13.51□□□□□ -0.25
PCCB-210ENST00000471595 ANGPTL8Q6UXH0 198 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms