RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 PHKA1P46020 1223 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 TFF2Q03403 129 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 PLS1Q14651 629 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 RBM20Q5T481 1227 aaKnown RBP4.06□□□□□ -1.76
COPS3-206ENST00000471414 VPS53Q5VIR6 699 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 SLC30A10Q6XR72 485 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 PTF1AQ7RTS3 328 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 USP37Q86T82 979 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 HPS3Q969F9 1004 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 MVB12AQ96EY5 273 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 SERHLQ9NQF3 203 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 SERTAD4Q9NUC0 356 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 LMBRD1Q9NUN5 540 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 PNPOQ9NVS9 261 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 NOP58Q9Y2X3 529 aaKnown RBP4.06□□□□□ -1.76
COPS3-206ENST00000471414 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 F5H697 171 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 DCLK1O15075 740 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 JUPP14923 745 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 VCAM1P19320 739 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 ITGALP20701 1170 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 DRD4P21917 467 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 GCLCP48506 637 aaPredicted RBP4.05□□□□□ -1.76
COPS3-206ENST00000471414 KRTAP10-11P60412 298 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 TSTD2Q5T7W7 516 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 FAM160B1Q5W0V3 765 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 ZBTB46Q86UZ6 589 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 HASPINQ8TF76 798 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 STAG1Q8WVM7 1258 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 TNPO1Q92973 898 aaKnown RBP4.05□□□□□ -1.76
COPS3-206ENST00000471414 FKBP10Q96AY3 582 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 FAM136AQ96C01 138 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 ACTRT3Q9BYD9 372 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 TPSD1Q9BZJ3 242 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 CPNE5Q9HCH3 593 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 EHD3Q9NZN3 535 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 DKK3Q9UBP4 350 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 HESX1Q9UBX0 185 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 RAD54BQ9Y620 910 aa4.05□□□□□ -1.76
COPS3-206ENST00000471414 ZNF213O14771 459 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 IL33O95760 270 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 ALDH2P05091 517 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 CHRM3P20309 590 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 CD6P30203 668 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 ZNF134P52741 427 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 AKNAD1Q5T1N1 836 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 FCRLBQ6BAA4 426 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 C1QL2Q7Z5L3 287 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 DTX2Q86UW9 622 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 PLBD2Q8NHP8 589 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 NELL2Q99435 816 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 RHOBTB2Q9BYZ6 727 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 SLAMF7Q9NQ25 335 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 SERGEFQ9UGK8 458 aa4.04□□□□□ -1.76
COPS3-206ENST00000471414 ERC2O15083 957 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 VPS4BO75351 444 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 LATS1O95835 1130 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 GNAI2P04899 355 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 PRKCGP05129 697 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 ZFXP17010 805 aaPredicted RBP4.03□□□□□ -1.76
COPS3-206ENST00000471414 PPIFP30405 207 aaKnown RBP4.03□□□□□ -1.76
COPS3-206ENST00000471414 EXOSC9Q06265 439 aaKnown RBP4.03□□□□□ -1.76
COPS3-206ENST00000471414 BMPR2Q13873 1038 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 B3GNT9Q6UX72 402 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 AMIGO2Q86SJ2 522 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 KLHDC4Q8TBB5 520 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 REPS1Q96D71 796 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 HOOK2Q96ED9 719 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 SLC35A4Q96G79 324 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 MRGPRX1Q96LB2 322 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 HAPLN3Q96S86 360 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 C1QTNF7Q9BXJ2 289 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 SSX2IPQ9Y2D8 614 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 ANKRD6Q9Y2G4 727 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 MED16Q9Y2X0 877 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 PCDHA1Q9Y5I3 950 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 NR2E3Q9Y5X4 410 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 WNT6Q9Y6F9 365 aa4.03□□□□□ -1.76
COPS3-206ENST00000471414 POLR2AP24928 1970 aaKnown RBP4.03□□□□□ -1.76
COPS3-206ENST00000471414 MANSC4A6NHS7 340 aaPredicted RBP4.02□□□□□ -1.77
COPS3-206ENST00000471414 LINC01548A6NM66 108 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 M0QYG6 137 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 PPM1DO15297 605 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 NXPH3O95157 252 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 TTLL1O95922 423 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 CELA2AP08217 269 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 NR2F6P10588 404 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 CDK4P11802 303 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 HDCP19113 662 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 LMO1P25800 156 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 LOXL3P58215 753 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 SSBP2P81877 361 aaPredicted RBP4.02□□□□□ -1.77
COPS3-206ENST00000471414 MCL1Q07820 350 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 ZNF618Q5T7W0 954 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 TEDDM1Q5T9Z0 273 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 PAPD7Q5XG87 772 aaKnown RBP4.02□□□□□ -1.77
COPS3-206ENST00000471414 SFRP4Q6FHJ7 346 aaPredicted RBP4.02□□□□□ -1.77
COPS3-206ENST00000471414 TMEM108Q6UXF1 575 aa4.02□□□□□ -1.77
COPS3-206ENST00000471414 ZNF551Q7Z340 670 aaPredicted RBP4.02□□□□□ -1.77
COPS3-206ENST00000471414 MAVSQ7Z434 540 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms