RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 HS3ST4Q9Y661 456 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 PMF1-BGLAPU3KQ54 211 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 ZNF503-AS2A6NEH8 195 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 HMX3A6NHT5 357 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 A6NLC8 198 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 BTBD11A6QL63 1104 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 PAX4O43316 350 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 TIMM44O43615 452 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 FAM155BO75949 473 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 USP1O94782 785 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 AGFG2O95081 481 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 KIF20AO95235 890 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 ATP1A3P13637 1013 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 IDEP14735 1019 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 JUPP14923 745 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 PECAM1P16284 738 aaPredicted RBP7.7□□□□□ -1.18
SMC5-202ENST00000471372 ADD2P35612 726 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 LIFRP42702 1097 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 MXRA7P84157 204 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 MRPL49Q13405 166 aaKnown RBP7.7□□□□□ -1.18
SMC5-202ENST00000471372 MAPKAPK3Q16644 382 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 ANKRD45Q5TZF3 282 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 ARL6IP4Q66PJ3 421 aaKnown RBP7.7□□□□□ -1.18
SMC5-202ENST00000471372 TMEM132EQ6IEE7 984 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 CFAP161Q6P656 301 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 GATAD2AQ86YP4 633 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 TMTC2Q8N394 836 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 FAM46DQ8NEK8 389 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 MAELQ96JY0 434 aaKnown RBP7.7□□□□□ -1.18
SMC5-202ENST00000471372 YTHDC1Q96MU7 727 aaKnown RBP7.7□□□□□ -1.18
SMC5-202ENST00000471372 DIRC2Q96SL1 478 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 SAYSD1Q9NPB0 183 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 USP40Q9NVE5 1235 aa7.7□□□□□ -1.18
SMC5-202ENST00000471372 HERC5Q9UII4 1024 aaKnown RBP7.7□□□□□ -1.18
SMC5-202ENST00000471372 TEX51A0A1B0GUA7 166 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 E9PLN8 166 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 H7C4K7 107 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 AMHP03971 560 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 ITGA2BP08514 1039 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 SNRPA1P09661 255 aaKnown RBP7.69□□□□□ -1.18
SMC5-202ENST00000471372 NPPBP16860 134 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 RPL13P26373 211 aaKnown RBP7.69□□□□□ -1.18
SMC5-202ENST00000471372 ELF1P32519 619 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 PRKAA2P54646 552 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 FSTL1Q12841 308 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 CUL4BQ13620 913 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 USP10Q14694 798 aaKnown RBP7.69□□□□□ -1.18
SMC5-202ENST00000471372 TOMM20Q15388 145 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 ADCK5Q3MIX3 580 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 PLAG1Q6DJT9 500 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 FCRL6Q6DN72 434 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 ADGRE4PQ86SQ3 457 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 CCDC28AQ8IWP9 274 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 AOPEPQ8N6M6 819 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 SLC17A8Q8NDX2 589 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 DNERQ8NFT8 737 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 HERVK_113Q902F9 699 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 DDX17Q92841 729 aaKnown RBP7.69□□□□□ -1.18
SMC5-202ENST00000471372 SCAMP4Q969E2 229 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 VKORC1Q9BQB6 163 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 SPATA5L1Q9BVQ7 753 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 GCM1Q9NP62 436 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 BLOC1S4Q9NUP1 217 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 LPAR3Q9UBY5 353 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 TMEM98Q9Y2Y6 226 aa7.69□□□□□ -1.18
SMC5-202ENST00000471372 MTO1Q9Y2Z2 717 aaKnown RBP7.69□□□□□ -1.18
SMC5-202ENST00000471372 CDHR4A6H8M9 788 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 HOXC11O43248 304 aaPredicted RBP7.68□□□□□ -1.18
SMC5-202ENST00000471372 SOAT2O75908 522 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 STC2O76061 302 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 ANXA1P04083 346 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 CST5P28325 142 aaPredicted RBP7.68□□□□□ -1.18
SMC5-202ENST00000471372 ATICP31939 592 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 CPT1AP50416 773 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 IRAK1P51617 712 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 CLRN1P58418 232 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 FAM214AQ32MH5 1076 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 AMOTQ4VCS5 1084 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 MZT2BQ6NZ67 158 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 USP17L6PQ6QN14 398 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 CBLL1Q75N03 491 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 PDILTQ8N807 584 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 CCDC89Q8N998 374 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 PCYOX1LQ8NBM8 494 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 SCAMP5Q8TAC9 235 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 FNIP1Q8TF40 1166 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 AFG1LQ8WV93 481 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 KLHL32Q96NJ5 620 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 CPEB1Q9BZB8 566 aaKnown RBP7.68□□□□□ -1.18
SMC5-202ENST00000471372 PABPC3Q9H361 631 aaKnown RBP7.68□□□□□ -1.18
SMC5-202ENST00000471372 NSUN3Q9H649 340 aaKnown RBP7.68□□□□□ -1.18
SMC5-202ENST00000471372 IL23AQ9NPF7 189 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 JADE2Q9NQC1 790 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 ATP11BQ9Y2G3 1177 aa7.68□□□□□ -1.18
SMC5-202ENST00000471372 LOC102723971A0A1B0GUV8 181 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 PJA2O43164 708 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 ACTL6BO94805 426 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 ALAS1P13196 640 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 XBP1P17861 261 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 FDXRP22570 491 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms