RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GSCP56915 257 aaPredicted RBP9.96□□□□□ -0.82
VPS52-216ENST00000471309 LILRA4P59901 499 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 TUBB4BP68371 445 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 ITIH3Q06033 890 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 ORC1Q13415 861 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 CNGA2Q16280 664 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 ARHGAP17Q68EM7 881 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 PLEKHA7Q6IQ23 1121 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 DENND1BQ6P3S1 775 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 LCLAT1Q6UWP7 414 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 MMS22LQ6ZRQ5 1243 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 SLC24A5Q71RS6 500 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 CTAGE6Q86UF2 777 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 CREG2Q8IUH2 290 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 CTAGE4Q8IX94 777 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 ANKLE1Q8NAG6 615 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 LRRN4CLQ8ND94 238 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 APPL2Q8NEU8 664 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 KBTBD7Q8WVZ9 684 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 GOLGA1Q92805 767 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 APBB2Q92870 758 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 HES6Q96HZ4 224 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 UROC1Q96N76 676 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 TOX2Q96NM4 488 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 GOLPH3Q9H4A6 298 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 RNF14Q9UBS8 474 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 LCMT1Q9UIC8 334 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 AMFRQ9UKV5 643 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 PACSIN2Q9UNF0 486 aaPredicted RBP9.96□□□□□ -0.82
VPS52-216ENST00000471309 TCRBV5S1A1TA0A578 114 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 A8MXQ7 604 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 M0QYV0 167 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 PODXLO00592 558 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 ZNF185O15231 689 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 PQBP1O60828 265 aaKnown RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 HUS1O60921 280 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 NBNO60934 754 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 MICAL2O94851 1124 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 PARNO95453 639 aaKnown RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 TFRCP02786 760 aaKnown RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 SETSIPP0DME0 302 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 HSPA8P11142 646 aaKnown RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 SSTR3P32745 418 aaPredicted RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 AFF1P51825 1210 aaKnown RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 FAM189BP81408 668 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 TAP1Q03518 808 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 TUSC3Q13454 348 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 MAMLD1Q13495 774 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 PKN2Q16513 984 aaKnown RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 UPP1Q16831 310 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 PLEKHG4Q58EX7 1191 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 SLC39A5Q6ZMH5 540 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 RSRC2Q7L4I2 434 aaKnown RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 ERICH1Q86X53 443 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 ADGRF2Q8IZF7 708 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 CRYBG2Q8N1P7 616 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 WDTC1Q8N5D0 677 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 RNF169Q8NCN4 708 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 MSANTD4Q8NCY6 345 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 OR6B3Q8NGW1 331 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 SPATA18Q8TC71 538 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 COG1Q8WTW3 980 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 UBXN4Q92575 508 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 SEPT8Q92599 483 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 DDX27Q96GQ7 796 aaKnown RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 PBKQ96KB5 322 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 CAPZA3Q96KX2 299 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 HEXIM2Q96MH2 286 aaKnown RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 SNX25Q9H3E2 840 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 ELAC1Q9H777 363 aaKnown RBP9.95□□□□□ -0.82
VPS52-216ENST00000471309 PARVAQ9NVD7 372 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 TMEM161AQ9NX61 479 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 MIOSQ9NXC5 875 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 ANAPC7Q9UJX3 599 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 TSPAN16Q9UKR8 245 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 L1RE1Q9UN81 338 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 NME7Q9Y5B8 376 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 ALG6Q9Y672 507 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 MYH10P35580 1976 aa9.95□□□□□ -0.82
VPS52-216ENST00000471309 DCDC2CA8MYV0 355 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 CYB561D2O14569 222 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 KCNK3O14649 394 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 DDX3YO15523 660 aaKnown RBP9.94□□□□□ -0.82
VPS52-216ENST00000471309 FGFR1P11362 822 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 CXCR5P32302 372 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 MAN1A1P33908 653 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 CTNNA1P35221 906 aaKnown RBP9.94□□□□□ -0.82
VPS52-216ENST00000471309 PAFAH1B1P43034 410 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 GPD2P43304 727 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 AARSP49588 968 aaKnown RBP eCLIP9.94□□□□□ -0.82
VPS52-216ENST00000471309 CLCNKBP51801 687 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 PDCLQ13371 301 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 MESDQ14696 234 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 GPNMBQ14956 572 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 GOLGA7BQ2TAP0 167 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 CFAP221Q4G0U5 840 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 PTPN20Q4JDL3 420 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 PKDCCQ504Y2 493 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 PPP1R15BQ5SWA1 713 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 CCDC181Q5TID7 509 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms