RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 LEO1Q8WVC0 666 aaPredicted RBP14.52□□□□□ -0.09
HMGN1-211ENST00000471260 INTS13Q9NVM9 706 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 HSPBP1Q9NZL4 362 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 MRPS17Q9Y2R5 130 aaKnown RBP14.52□□□□□ -0.09
HMGN1-211ENST00000471260 ZDHHC9Q9Y397 364 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 TSC2P49815 1807 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 A0A1W2PRU2 124 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 MAN2B1O00754 1011 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 GFRA3O60609 400 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 PRPF40AO75400 957 aaKnown RBP14.51□□□□□ -0.09
HMGN1-211ENST00000471260 TNNC2P02585 160 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 DCNP07585 359 aaKnown RBP14.51□□□□□ -0.09
HMGN1-211ENST00000471260 GLULP15104 373 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 HOXD13P35453 343 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 LHX1P48742 406 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 MLLT6P55198 1093 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-211ENST00000471260 MYL7Q01449 175 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 DNM1Q05193 864 aaKnown RBP14.51□□□□□ -0.09
HMGN1-211ENST00000471260 PKP1Q13835 747 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 TEAD2Q15562 447 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 ZSCAN23Q3MJ62 389 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 FOXD4L6Q3SYB3 417 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-211ENST00000471260 MGAT5BQ3V5L5 792 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 ARHGAP15Q53QZ3 475 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 FOXD4L3Q6VB84 417 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-211ENST00000471260 ZNF852Q6ZMS4 543 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 HS2ST1Q7LGA3 356 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 LRRTM3Q86VH5 581 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 WDR49Q8IV35 697 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 C1orf210Q8IVY1 113 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 MFSD6LQ8IWD5 586 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 CEP57L1Q8IYX8 460 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 TOP6BLQ8N6T0 577 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 GLIS3Q8NEA6 775 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 HPS3Q969F9 1004 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 ZSWIM3Q96MP5 696 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 SEPT5Q99719 369 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-211ENST00000471260 BCO2Q9BYV7 579 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 MTMR12Q9C0I1 747 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 SEMA4AQ9H3S1 761 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 SLITRK6Q9H5Y7 841 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 BRD9Q9H8M2 597 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 AGPAT3Q9NRZ7 376 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 USP25Q9UHP3 1055 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 PCDHB5Q9Y5E4 795 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 ATP6V1DQ9Y5K8 247 aa14.51□□□□□ -0.09
HMGN1-211ENST00000471260 FAM170BA6NMN3 283 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 GABRDO14764 452 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 TGFB1I1O43294 461 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 MYL1P05976 194 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 KRT19P08727 400 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 SLFN14P0C7P3 912 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 HAPLN1P10915 354 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-211ENST00000471260 GJA1P17302 382 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 CDC25CP30307 473 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 TAF12Q16514 161 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 BMT2Q1RMZ1 405 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 C1orf228Q6PIY5 440 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 VITQ6UXI7 678 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 GAREM2Q75VX8 874 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 GAS2L3Q86XJ1 694 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 CBWD2Q8IUF1 395 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 C12orf56Q8IXR9 622 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 PDCL2Q8N4E4 241 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 TTC9BQ8N6N2 239 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 FAM200AQ8TCP9 573 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 NOC3LQ8WTT2 800 aaKnown RBP14.5□□□□□ -0.09
HMGN1-211ENST00000471260 SCFD1Q8WVM8 642 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 GCNAQ96QF7 691 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 FOXQ1Q9C009 403 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 ATXN3LQ9H3M9 355 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 ZNF334Q9HCZ1 680 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-211ENST00000471260 ABCB6Q9NP58 842 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 LTB4R2Q9NPC1 389 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 HEBP1Q9NRV9 189 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 OBP2AQ9NY56 170 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 SIX4Q9UIU6 781 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 L1RE1Q9UN81 338 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 SNX9Q9Y5X1 595 aa14.5□□□□□ -0.09
HMGN1-211ENST00000471260 SOBPA7XYQ1 873 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 HEPACAM2A8MVW5 462 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 ESPNB1AK53 854 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 TULP1O00294 542 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-211ENST00000471260 NRG2O14511 850 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-211ENST00000471260 ZNF263O14978 683 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 ATF6P18850 670 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 CMA1P23946 247 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 GABRR2P28476 465 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 PCSK1P29120 753 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 RPS9P46781 194 aaKnown RBP14.49□□□□□ -0.09
HMGN1-211ENST00000471260 KRT85P78386 507 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 FCHO2Q0JRZ9 810 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 BFSP1Q12934 665 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 PSMD2Q13200 908 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 GRM2Q14416 872 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 UBXN2BQ14CS0 331 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 SNRNP35Q16560 246 aaKnown RBP14.49□□□□□ -0.09
HMGN1-211ENST00000471260 TPRG1Q6ZUI0 275 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 XXYLT1Q8NBI6 393 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 GOLGA5Q8TBA6 731 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms