RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 IFT57Q9NWB7 429 aa3.64□□□□□ -1.83
CLIP4-209ENST00000471165 RGS17Q9UGC6 210 aaPredicted RBP3.64□□□□□ -1.83
CLIP4-209ENST00000471165 ADAMTSL3P82987 1691 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 JMJD7P0C870 316 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 ERCC5P28715 1186 aaPredicted RBP3.63□□□□□ -1.83
CLIP4-209ENST00000471165 NPTX2P47972 431 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 EEFSECP57772 596 aaKnown RBP3.63□□□□□ -1.83
CLIP4-209ENST00000471165 DDR1Q08345 913 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 TBCCQ15814 346 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 NSUN7Q8NE18 718 aaKnown RBP3.63□□□□□ -1.83
CLIP4-209ENST00000471165 B4GALNT2Q8NHY0 566 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 CHTF18Q8WVB6 975 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 ZNF479Q96JC4 524 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 CLUHP3Q96NS8 147 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 TINF2Q9BSI4 451 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 TMEM140Q9NV12 185 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 RUVBL1Q9Y265 456 aaKnown RBP3.63□□□□□ -1.83
CLIP4-209ENST00000471165 ABCC2Q92887 1545 aa3.63□□□□□ -1.83
CLIP4-209ENST00000471165 MADDQ8WXG6 1647 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 PTPRTO14522 1441 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 CD109Q6YHK3 1445 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 CCDC195A0A1B0GUA6 201 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 KIAA0391O15091 583 aaKnown RBP3.62□□□□□ -1.83
CLIP4-209ENST00000471165 FLT3P36888 993 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 CYP4F2P78329 520 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 INPP5JQ15735 1006 aaPredicted RBP3.62□□□□□ -1.83
CLIP4-209ENST00000471165 ZNF324BQ6AW86 544 aaPredicted RBP3.62□□□□□ -1.83
CLIP4-209ENST00000471165 NAPRTQ6XQN6 538 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 COLCA1Q6ZS62 124 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 CYP2W1Q8TAV3 490 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 MRRFQ96E11 262 aaKnown RBP3.62□□□□□ -1.83
CLIP4-209ENST00000471165 LRIG1Q96JA1 1093 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 MEIS3Q99687 375 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 MACROD1Q9BQ69 325 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 TPSD1Q9BZJ3 242 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 HEY2Q9UBP5 337 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 KCNG1Q9UIX4 513 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 ZNF335Q9H4Z2 1342 aaPredicted RBP3.62□□□□□ -1.83
CLIP4-209ENST00000471165 PBRM1Q86U86 1689 aa3.62□□□□□ -1.83
CLIP4-209ENST00000471165 PRDM2Q13029 1718 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 CUX1P39880 1505 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 A0A0B4J269 797 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 QSOX1O00391 747 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 PLD2O14939 933 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 NXPH3O95157 252 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 TNFRSF8P28908 595 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 ME1P48163 572 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 TUBB3Q13509 450 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 SEPT7Q16181 437 aaKnown RBP3.61□□□□□ -1.83
CLIP4-209ENST00000471165 PCID2Q5JVF3 399 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 MEX3CQ5U5Q3 659 aaKnown RBP3.61□□□□□ -1.83
CLIP4-209ENST00000471165 FRMD7Q6ZUT3 714 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 FAM9AQ8IZU1 332 aaPredicted RBP3.61□□□□□ -1.83
CLIP4-209ENST00000471165 ZSWIM2Q8NEG5 633 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 HOXB13Q92826 284 aaPredicted RBP3.61□□□□□ -1.83
CLIP4-209ENST00000471165 MMS19Q96T76 1030 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 THG1LQ9NWX6 298 aaKnown RBP3.61□□□□□ -1.83
CLIP4-209ENST00000471165 DLL3Q9NYJ7 618 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 EDARQ9UNE0 448 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 LTBP4Q8N2S1 1624 aa3.61□□□□□ -1.83
CLIP4-209ENST00000471165 IQSEC2Q5JU85 1478 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 ABCA10Q8WWZ4 1543 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 ADAMTS12P58397 1594 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 E7ENX8 843 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 DSCR3O14972 297 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 TOM1O60784 492 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 GAS7O60861 476 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 NGFRP08138 427 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 CYP2A6P11509 494 aaPredicted RBP3.6□□□□□ -1.83
CLIP4-209ENST00000471165 CYP19A1P11511 503 aaPredicted RBP3.6□□□□□ -1.83
CLIP4-209ENST00000471165 LSP1P33241 339 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 TAP2Q03519 686 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 CFAP100Q494V2 611 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 GJC2Q5T442 439 aaPredicted RBP3.6□□□□□ -1.83
CLIP4-209ENST00000471165 TRIM72Q6ZMU5 477 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 NXPE1Q8N323 547 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 TMEM204Q9BSN7 226 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 ZMYM2Q9UBW7 1377 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 KIAA0586Q9BVV6 1533 aa3.6□□□□□ -1.83
CLIP4-209ENST00000471165 MAP3K4Q9Y6R4 1608 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 HAUS5O94927 633 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 AGFG2O95081 481 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 F2P00734 622 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 RHCEP18577 417 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 SLC6A4P31645 630 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 GHRHRQ02643 423 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 ZNF268Q14587 947 aaPredicted RBP3.59□□□□□ -1.83
CLIP4-209ENST00000471165 PDCD1Q15116 288 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 BSPRYQ5W0U4 402 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 ATRIPQ8WXE1 791 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 TAF15Q92804 592 aaKnown RBP eCLIP3.59□□□□□ -1.83
CLIP4-209ENST00000471165 ORAI3Q9BRQ5 295 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 ACTRT3Q9BYD9 372 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 AMBRA1Q9C0C7 1298 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 SELENONQ9NZV5 590 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 TNIKQ9UKE5 1360 aa3.59□□□□□ -1.83
CLIP4-209ENST00000471165 ABCA5Q8WWZ7 1642 aa3.59□□□□□ -1.84
CLIP4-209ENST00000471165 RIMS1Q86UR5 1692 aaKnown RBP3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms