RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 PHF13Q86YI8 300 aaPredicted RBP9.47□□□□□ -0.89
LMCD1-207ENST00000470776 TMEM199Q8N511 208 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 RNF169Q8NCN4 708 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 APPL2Q8NEU8 664 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 TSC1Q92574 1164 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 RABGGTAQ92696 567 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 GOLGA1Q92805 767 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 CYFIP2Q96F07 1278 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 CALR3Q96L12 384 aaKnown RBP9.47□□□□□ -0.89
LMCD1-207ENST00000470776 SENP8Q96LD8 212 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 MMS19Q96T76 1030 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 PACSIN1Q9BY11 444 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 ZMYND15Q9H091 742 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 TRIM10Q9UDY6 481 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 TFR2Q9UP52 801 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 DUSP10Q9Y6W6 482 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 NCANO14594 1321 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 SZT2Q5T011 3432 aa9.47□□□□□ -0.89
LMCD1-207ENST00000470776 CITO14578 2027 aa9.46□□□□□ -0.89
LMCD1-207ENST00000470776 ARHGEF37A1IGU5 675 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 CASTOR2A6NHX0 329 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 O00370 1275 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 THAP12O43422 761 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 B4GALT3O60512 393 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 TADA3O75528 432 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 URI1O94763 535 aaPredicted RBP9.46□□□□□ -0.9
LMCD1-207ENST00000470776 MTA2O94776 668 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 CYP1A2P05177 515 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 CFHP08603 1231 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 MYBL1P10243 752 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 RAG1P15918 1043 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 TYMPP19971 482 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 MCM3P25205 808 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 BRD2P25440 801 aaKnown RBP9.46□□□□□ -0.9
LMCD1-207ENST00000470776 GNL1P36915 607 aaPredicted RBP9.46□□□□□ -0.9
LMCD1-207ENST00000470776 LHX1P48742 406 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 GNG11P61952 73 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 GPC5P78333 572 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 CBX1P83916 185 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 PTP4A2Q12974 167 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 GPS2Q13227 327 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 PKDCCQ504Y2 493 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 TIGD5Q53EQ6 642 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 TEX35Q5T0J7 233 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 LCLAT1Q6UWP7 414 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.46□□□□□ -0.9
LMCD1-207ENST00000470776 DEFB128Q7Z7B8 93 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 OSTM1Q86WC4 334 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 ZNF280BQ86YH2 543 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 MCOLN2Q8IZK6 566 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 WDTC1Q8N5D0 677 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 TMEM35BQ8NCS4 154 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 RFFLQ8WZ73 363 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 TOP1MTQ969P6 601 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 SUSD3Q96L08 255 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 PAAF1Q9BRP4 392 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 TMEM175Q9BSA9 504 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 MRPL9Q9BYD2 267 aaKnown RBP9.46□□□□□ -0.9
LMCD1-207ENST00000470776 IRX2Q9BZI1 471 aaPredicted RBP9.46□□□□□ -0.9
LMCD1-207ENST00000470776 DNAI2Q9GZS0 605 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 NRDE2Q9H7Z3 1164 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 AVENQ9NQS1 362 aaPredicted RBP9.46□□□□□ -0.9
LMCD1-207ENST00000470776 HMGXB4Q9UGU5 601 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 GTF3C4Q9UKN8 822 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 DSEQ9UL01 958 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 LRFN2Q9ULH4 789 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 GUCA1BQ9UMX6 200 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.46□□□□□ -0.9
LMCD1-207ENST00000470776 INPP5FQ9Y2H2 1132 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 STXBP5LQ9Y2K9 1186 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 PCDHGC5Q9Y5F6 944 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 MRFAP1Q9Y605 127 aa9.46□□□□□ -0.9
LMCD1-207ENST00000470776 PDCD11Q14690 1871 aaKnown RBP9.46□□□□□ -0.9
LMCD1-207ENST00000470776 TANC1Q9C0D5 1861 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 A8MXQ7 604 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 FANCGO15287 622 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 ERLIN1O75477 346 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 DGKIO75912 1065 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 B3GAT3O94766 335 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 BAIAP3O94812 1187 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 CLSTN1O94985 981 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 CSF2RAP15509 400 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 MMP8P22894 467 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 LMO2P25791 158 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 GSCP56915 257 aaPredicted RBP9.45□□□□□ -0.9
LMCD1-207ENST00000470776 C1QBPQ07021 282 aaKnown RBP9.45□□□□□ -0.9
LMCD1-207ENST00000470776 BRD3Q15059 726 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 IFI16Q16666 785 aaKnown RBP9.45□□□□□ -0.9
LMCD1-207ENST00000470776 SGO2Q562F6 1265 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 WSCD1Q658N2 575 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 FBXO38Q6PIJ6 1188 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 DSTYKQ6XUX3 929 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 MON1BQ7L1V2 547 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 SLFN11Q7Z7L1 901 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 RHOT2Q8IXI1 618 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 ADGRF2Q8IZF7 708 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 ABI1Q8IZP0 508 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 SLC35F6Q8N357 371 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 TRIM58Q8NG06 486 aa9.45□□□□□ -0.9
LMCD1-207ENST00000470776 OR6B3Q8NGW1 331 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms