RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 LRRC3BQ96PB8 259 aa9.69□□□□□ -0.86
SYNGAP1-205ENST00000470232 P2RY13Q9BPV8 354 aa9.69□□□□□ -0.86
SYNGAP1-205ENST00000470232 AGXT2Q9BYV1 514 aa9.69□□□□□ -0.86
SYNGAP1-205ENST00000470232 CCDC113Q9H0I3 377 aa9.69□□□□□ -0.86
SYNGAP1-205ENST00000470232 TTC12Q9H892 705 aaPredicted RBP9.69□□□□□ -0.86
SYNGAP1-205ENST00000470232 PDRG1Q9NUG6 133 aa9.69□□□□□ -0.86
SYNGAP1-205ENST00000470232 HSFX1Q9UBD0 423 aa9.69□□□□□ -0.86
SYNGAP1-205ENST00000470232 TNFSF13BQ9Y275 285 aa9.69□□□□□ -0.86
SYNGAP1-205ENST00000470232 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.69□□□□□ -0.86
SYNGAP1-205ENST00000470232 THADAQ6YHU6 1953 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 NUP210Q8TEM1 1887 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 FREM2Q5SZK8 3169 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 PHLPP2Q6ZVD8 1323 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 ARHGEF35A5YM69 484 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 CDKL5O76039 1030 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 ALDH1A2O94788 518 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 AVPR1AP37288 418 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 TXKP42681 527 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 TUFMP49411 452 aaKnown RBP9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 OSTNP61366 133 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 BFSP1Q12934 665 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 NR1H3Q13133 447 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 PSMD2Q13200 908 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 BYSLQ13895 437 aaKnown RBP9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 MYBPC2Q14324 1141 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 NPY5RQ15761 445 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 FOXD4L6Q3SYB3 417 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 TRIM61Q5EBN2 209 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 NT5DC1Q5TFE4 455 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 LMBRD2Q68DH5 695 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 CENPPQ6IPU0 288 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 FOXD4L3Q6VB84 417 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 GAREM2Q75VX8 874 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 RUFY3Q7L099 469 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 PGLYRP2Q96PD5 576 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 FAM83CQ9BQN1 747 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 TCHPQ9BT92 498 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 TM6SF1Q9BZW5 370 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 EBF3Q9H4W6 596 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 CCDC86Q9H6F5 360 aaKnown RBP9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 BRMS1Q9HCU9 246 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 TUFT1Q9NNX1 390 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 KCNJ14Q9UNX9 436 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 USP20Q9Y2K6 914 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 CYP46A1Q9Y6A2 500 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 LOC400499M0QZD8 3231 aa9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 KIF26AQ9ULI4 1882 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-205ENST00000470232 ABCA7Q8IZY2 2146 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 A0A087WWV3 80 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 SPAARA0A1B0GVQ0 90 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 PATE3B3GLJ2 98 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 M0QZQ0 153 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 GADD45BO75293 160 aaPredicted RBP9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 CYP11B2P19099 503 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 DDX6P26196 483 aaKnown RBP eCLIP9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 MAPK8P45983 427 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 PSEN1P49768 467 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 PDAP1Q13442 181 aaKnown RBP9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 PDGFRLQ15198 375 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 COL28A1Q2UY09 1125 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 ZNF568Q3ZCX4 644 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 SPDYCQ5MJ68 293 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 DSTYKQ6XUX3 929 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 LPCAT2Q7L5N7 544 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 CCDC83Q8IWF9 413 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 CMTM8Q8IZV2 173 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 CHCHD4Q8N4Q1 142 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 CPA6Q8N4T0 437 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 GLIS3Q8NEA6 775 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 CEP76Q8TAP6 659 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 KIFAP3Q92845 792 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 KCNB2Q92953 911 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 CD101Q93033 1021 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 ZNF274Q96GC6 653 aaPredicted RBP9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 PDLIM2Q96JY6 352 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 SPACA7Q96KW9 195 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 MRPL4Q9BYD3 311 aaKnown RBP9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 DNAJC25Q9H1X3 360 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 KIF9Q9HAQ2 790 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 CNTN3Q9P232 1028 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 INVSQ9Y283 1065 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 SLC27A5Q9Y2P5 690 aa9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 ASCC3Q8N3C0 2202 aaKnown RBP9.67□□□□□ -0.86
SYNGAP1-205ENST00000470232 TNFRSF10BO14763 440 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 STX6O43752 255 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 OPHN1O60890 802 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 PRAMEF12O95522 483 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 F13A1P00488 732 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 TPM2P07951 284 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 MCF2P10911 925 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 ENGP17813 658 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 PAX3P23760 479 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 C19orf57Q0VDD7 668 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 SCAPQ12770 1279 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 SEMA3BQ13214 749 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 CCDC183Q5T5S1 534 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 SLC23A3Q6PIS1 610 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 RABEPKQ7Z6M1 372 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms