RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 TBC1D4O60343 1298 aa18.93■□□□□ 0.62
MRPL28-208ENST00000469744 HNRNPA1P09651 372 aaKnown RBP eCLIP18.93■□□□□ 0.62
MRPL28-208ENST00000469744 CYP3A5P20815 502 aa18.93■□□□□ 0.62
MRPL28-208ENST00000469744 CASP14P31944 242 aa18.93■□□□□ 0.62
MRPL28-208ENST00000469744 MRPL58Q14197 206 aaKnown RBP18.93■□□□□ 0.62
MRPL28-208ENST00000469744 TMEM132DQ14C87 1099 aa18.93■□□□□ 0.62
MRPL28-208ENST00000469744 FAM26FQ5R3K3 315 aa18.93■□□□□ 0.62
MRPL28-208ENST00000469744 CRELD2Q6UXH1 353 aaPredicted RBP18.93■□□□□ 0.62
MRPL28-208ENST00000469744 BMP8AQ7Z5Y6 402 aa18.93■□□□□ 0.62
MRPL28-208ENST00000469744 UBALD2Q8IYN6 164 aa18.93■□□□□ 0.62
MRPL28-208ENST00000469744 SAAL1Q96ER3 474 aa18.93■□□□□ 0.62
MRPL28-208ENST00000469744 CNOT6LQ96LI5 555 aaKnown RBP18.93■□□□□ 0.62
MRPL28-208ENST00000469744 H7C4K7 107 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 XPOTO43592 962 aaKnown RBP18.92■□□□□ 0.62
MRPL28-208ENST00000469744 PRPF6O94906 941 aaKnown RBP18.92■□□□□ 0.62
MRPL28-208ENST00000469744 FSHRP23945 695 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 HOXA9P31269 272 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 FIGNQ5HY92 759 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 ZNF280DQ6N043 979 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 SYCP3Q8IZU3 236 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 FBXL6Q8N531 539 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 APPL2Q8NEU8 664 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 BEST2Q8NFU1 509 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 FAM213AQ9BRX8 229 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 EXOC7Q9UPT5 735 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 PCDHB13Q9Y5F0 798 aa18.92■□□□□ 0.62
MRPL28-208ENST00000469744 TSC2P49815 1807 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 M0QZQ0 153 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 PRRG1O14668 218 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 XYLBO75191 536 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 MTIF2P46199 727 aaKnown RBP18.91■□□□□ 0.62
MRPL28-208ENST00000469744 VCPP55072 806 aaKnown RBP18.91■□□□□ 0.62
MRPL28-208ENST00000469744 WNT7BP56706 349 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 DSTYKQ6XUX3 929 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 SUGP1Q8IWZ8 645 aaKnown RBP18.91■□□□□ 0.62
MRPL28-208ENST00000469744 CD302Q8IX05 232 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 ZNF461Q8TAF7 563 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 ERGIC2Q96RQ1 377 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 ABHD10Q9NUJ1 306 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 EPS15L1Q9UBC2 864 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 CAPN11Q9UMQ6 739 aa18.91■□□□□ 0.62
MRPL28-208ENST00000469744 GOLGA8IPA6NC78 632 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 GOLGA8JA6NMD2 632 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 SPTLC1O15269 473 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 NARSO43776 548 aaKnown RBP18.9■□□□□ 0.62
MRPL28-208ENST00000469744 ABLIM3O94929 683 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 SEC24AO95486 1093 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 CCDC175P0C221 793 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 LAMP2P13473 410 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 ELF1P32519 619 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 PLA2G5P39877 138 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 AARSP49588 968 aaKnown RBP eCLIP18.9■□□□□ 0.62
MRPL28-208ENST00000469744 YWHAHQ04917 246 aaPredicted RBP18.9■□□□□ 0.62
MRPL28-208ENST00000469744 TDGQ13569 410 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 ZCWPW2Q504Y3 356 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 IER5LQ5T953 404 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 C9orf57Q5W0N0 161 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 TRIM65Q6PJ69 517 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 MTERF4Q7Z6M4 381 aaKnown RBP18.9■□□□□ 0.62
MRPL28-208ENST00000469744 EFCAB13Q8IY85 973 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 ITFG1Q8TB96 612 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 FAM84AQ96KN4 292 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 CEP63Q96MT8 703 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 CBWD1Q9BRT8 395 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 PCIF1Q9H4Z3 704 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 CYP4F11Q9HBI6 524 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.9■□□□□ 0.626e-10■■■■■ 31.1
MRPL28-208ENST00000469744 DNMT3BQ9UBC3 853 aaKnown RBP18.9■□□□□ 0.62
MRPL28-208ENST00000469744 OR4Q2P0C623 313 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 PRKCSHP14314 528 aaPredicted RBP18.9■□□□□ 0.62
MRPL28-208ENST00000469744 CPB1P15086 417 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 ATF2P15336 505 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 LILRA4P59901 499 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 MAN2A1Q16706 1144 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 FKBP15Q5T1M5 1219 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 OR8K1Q8NGG5 319 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 CPLX3Q8WVH0 158 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 ING5Q8WYH8 240 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 ZNF592Q92610 1267 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 FAM122AQ96E09 287 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 TSPAN18Q96SJ8 248 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 ASB7Q9H672 318 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 L2HGDHQ9H9P8 463 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 IGSF9Q9P2J2 1179 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 DERAQ9Y315 318 aa18.9■□□□□ 0.62
MRPL28-208ENST00000469744 A0A1W2PQJ5 194 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 GNA14O95837 355 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 KRT9P35527 623 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 FKBP3Q00688 224 aaKnown RBP18.89■□□□□ 0.61
MRPL28-208ENST00000469744 ADCY1Q08828 1119 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 ALCAMQ13740 583 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 PABPC1LQ4VXU2 614 aaKnown RBP18.89■□□□□ 0.61
MRPL28-208ENST00000469744 MIIPQ5JXC2 388 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 RNF19BQ6ZMZ0 732 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 USP37Q86T82 979 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 CREBRFQ8IUR6 639 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 ZC3H3Q8IXZ2 948 aaKnown RBP18.89■□□□□ 0.61
MRPL28-208ENST00000469744 DNAJC7Q99615 494 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 DPP3Q9NY33 737 aa18.89■□□□□ 0.61
MRPL28-208ENST00000469744 DUSP12Q9UNI6 340 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms