RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 ODC1P11926 461 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 HOXB3P14651 431 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 CDC25AP30304 524 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 AVPR1AP37288 418 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 TRAPPC10P48553 1259 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 GALK1P51570 392 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 SMTNP53814 917 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 AMPD2Q01433 879 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 RAD51AP2Q09MP3 1159 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 FOXC1Q12948 553 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 ELF2Q15723 593 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 GIPC2Q8TF65 315 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 USP13Q92995 863 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 RAB34Q9BZG1 259 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 ZCWPW1Q9H0M4 648 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 ATG2BQ96BY7 2078 aa13.9□□□□□ -0.18
TRAPPC12-216ENST00000469400 ASPMQ8IZT6 3477 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 ZZEF1O43149 2961 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 ARSAP15289 507 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 SPINK2P20155 84 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 DRD1P21728 446 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 U2AF2P26368 475 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 NMT1P30419 496 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 ZNF252P-AS1Q0IIN9 211 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 BFSP1Q12934 665 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 ENOX2Q16206 610 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 TAF12Q16514 161 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 IL17AQ16552 155 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 SH3PXD2AQ5TCZ1 1133 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 DAB2IPQ5VWQ8 1189 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 SPATA1Q5VX52 437 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 C9orf57Q5W0N0 161 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 NAIF1Q69YI7 327 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 SYT13Q7L8C5 426 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 TMEM150AQ86TG1 271 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 MAB21L3Q8N8X9 362 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 RIN3Q8TB24 985 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 BICD1Q96G01 975 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 TSPAN18Q96SJ8 248 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 MMTAG2Q9BU76 263 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 TMEM121BQ9BXQ6 578 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 TDP1Q9NUW8 608 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 EBF1Q9UH73 591 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 ZMYM5Q9UJ78 669 aa13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 FASNP49327 2511 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 KIF26AQ9ULI4 1882 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-216ENST00000469400 LNP1A1A4G5 178 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 FAM189A1O60320 539 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 APBB3O95704 486 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 TOP3BO95985 862 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 F11P03951 625 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 CYP11A1P05108 521 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 ADRB2P07550 413 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 PAX3P23760 479 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 GNL2Q13823 731 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 KARSQ15046 597 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 KYAT1Q16773 422 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 FBXO43Q4G163 708 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 CC2D1AQ6P1N0 951 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 LRRTM3Q86VH5 581 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 FBXO18Q8NFZ0 1043 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 RPLP0P6Q8NHW5 317 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 P2RY13Q9BPV8 354 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 RPF1Q9H9Y2 349 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 TBX20Q9UMR3 447 aa13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 NOL7Q9UMY1 257 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-216ENST00000469400 LAMA1P25391 3075 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 SPEGQ15772 3267 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 PIRO00625 290 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 HAPLN1P10915 354 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 HMGA1P17096 107 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 DDX6P26196 483 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 GBP1P32455 592 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 GJA4P35212 333 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 LIG4P49917 911 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 TOB1P50616 345 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 NEK4P51957 841 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 NLRP12P59046 1061 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 DMC1Q14565 340 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 PDGFRLQ15198 375 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 ZRSR1Q15695 479 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 TXNDC8Q6A555 127 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 JADE1Q6IE81 842 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 C2orf15Q8WU43 125 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 EZH1Q92800 747 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 FAM212AQ96EL1 285 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 ADAM33Q9BZ11 813 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 KIF9Q9HAQ2 790 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 DSEQ9UL01 958 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 INVSQ9Y283 1065 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 PCDHB6Q9Y5E3 794 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 EML5Q05BV3 1969 aa13.87□□□□□ -0.19
TRAPPC12-216ENST00000469400 PKD1L2Q7Z442 2459 aa13.86□□□□□ -0.19
TRAPPC12-216ENST00000469400 NPHP3-ACAD11A0A0J9YXS1 232 aa13.86□□□□□ -0.19
TRAPPC12-216ENST00000469400 ANO9A1A5B4 782 aa13.86□□□□□ -0.19
TRAPPC12-216ENST00000469400 TMEM8BA6NDV4 472 aa13.86□□□□□ -0.19
TRAPPC12-216ENST00000469400 H0YCG3 227 aa13.86□□□□□ -0.19
TRAPPC12-216ENST00000469400 CDX4O14627 284 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC12-216ENST00000469400 KHNYNO15037 678 aaKnown RBP13.86□□□□□ -0.19
TRAPPC12-216ENST00000469400 OGTO15294 1046 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms