RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 ARHGEF37A1IGU5 675 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 CASTOR2A6NHX0 329 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 DDX3XO00571 662 aaKnown RBP eCLIP8.7□□□□□ -1.02
NPHP3-204ENST00000469232 CYB561D2O14569 222 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 NRP1O14786 923 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 ZNF263O14978 683 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 SYN3O14994 580 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 TBC1D4O60343 1298 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 OAZ2O95190 189 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 KIF4AO95239 1232 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 NDUFA10O95299 355 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 ITGB1P05556 798 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 PLEKP08567 350 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-204ENST00000469232 GZMAP12544 262 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 FGFR3P22607 806 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 SLC11A1P49279 550 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 CDH8P55286 799 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 CDR2Q01850 454 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 KLHL30Q0D2K2 578 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 SLC18A3Q16572 532 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 ARHGAP17Q68EM7 881 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 NOP9Q86U38 636 aaKnown RBP8.7□□□□□ -1.02
NPHP3-204ENST00000469232 SLC47A2Q86VL8 602 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 OSTM1Q86WC4 334 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 ABI1Q8IZP0 508 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 CLP1Q92989 425 aaKnown RBP8.7□□□□□ -1.02
NPHP3-204ENST00000469232 ZNF830Q96NB3 372 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-204ENST00000469232 TWNKQ96RR1 684 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 PKMYT1Q99640 499 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 RTP3Q9BQQ7 232 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 MRPL45Q9BRJ2 306 aaKnown RBP8.7□□□□□ -1.02
NPHP3-204ENST00000469232 ELOVL4Q9GZR5 314 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 CXXC1Q9P0U4 656 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-204ENST00000469232 CACNG4Q9UBN1 327 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 NXF1Q9UBU9 619 aaKnown RBP8.7□□□□□ -1.02
NPHP3-204ENST00000469232 DNAJB4Q9UDY4 337 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 DSEQ9UL01 958 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 PYCARDQ9ULZ3 195 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 STXBP5LQ9Y2K9 1186 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 R3HCC1Q9Y3T6 440 aaKnown RBP8.7□□□□□ -1.02
NPHP3-204ENST00000469232 PCDHB4Q9Y5E5 795 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 ADGRG1Q9Y653 693 aa8.7□□□□□ -1.02
NPHP3-204ENST00000469232 A0A087X0T9 212 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 SOWAHDA6NJG2 315 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 TBKBP1A7MCY6 615 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 NRDCO43847 1150 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 B3GAT3O94766 335 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 CYP1A1P04798 512 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 ALDH2P05091 517 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 FAM228BP0C875 321 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 LHX1P48742 406 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 FMO1Q01740 532 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 TCEAL1Q15170 157 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 PKDCCQ504Y2 493 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 C10orf76Q5T2E6 689 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 TMEM270Q6UE05 265 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 TRIM72Q6ZMU5 477 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 APPL2Q8NEU8 664 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 LNX1Q8TBB1 728 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 ZNF606Q8WXB4 792 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 TMEM176AQ96HP8 235 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 AGPAT1Q99943 283 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 GDF15Q99988 308 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 COLEC11Q9BWP8 271 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 NT5C1AQ9BXI3 368 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 ISCUQ9H1K1 167 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 LHX5Q9H2C1 402 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 ADAM28Q9UKQ2 775 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 NR2E3Q9Y5X4 410 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 F8W810 466 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 O00370 1275 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 PJA2O43164 708 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 HUS1O60921 280 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 VDRP11473 427 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 ODC1P11926 461 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 UNGP13051 313 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 CYLC1P35663 651 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 RAP1GAPP47736 663 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 RPL34P49207 117 aaKnown RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 KIF11P52732 1056 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 NDST1P52848 882 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 BCAR1P56945 870 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 ELAVL2Q12926 359 aaKnown RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 MTF1Q14872 753 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 STILQ15468 1287 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 CNGA2Q16280 664 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 SWT1Q5T5J6 900 aaKnown RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 WSCD1Q658N2 575 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 FAM171BQ6P995 826 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 OTOP2Q7RTS6 562 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 HERC6Q8IVU3 1022 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 ADGRF2Q8IZF7 708 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 TNS4Q8IZW8 715 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 SLC39A11Q8N1S5 342 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 SLC20A1Q8WUM9 679 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 BCL7CQ8WUZ0 217 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 TFAP2BQ92481 460 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 CCDC42Q96M95 316 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 PCDHB18PQ96TA0 734 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms