RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 FKBP14Q9NWM8 211 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 DUOX1Q9NRD9 1551 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 KRT86O43790 486 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 ADAM23O75077 832 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 C6orf222P0C671 652 aaPredicted RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 FGFR4P22455 802 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 CASP4P49662 377 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 CDK7P50613 346 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 BEX3Q00994 111 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 STK11Q15831 433 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 VSIG1Q86XK7 387 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 RHPN2Q8IUC4 686 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 CD302Q8IX05 232 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 FAM186BQ8IYM0 893 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 MMGT1Q8N4V1 131 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 GPRC5AQ8NFJ5 357 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 LRRC15Q8TF66 581 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 RAD54LQ92698 747 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 MXRA8Q9BRK3 442 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 JPH1Q9HDC5 661 aaPredicted RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 TTC7AQ9ULT0 858 aaPredicted RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 AFG3L2Q9Y4W6 797 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 PCP4L1A6NKN8 68 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 STAMBPO95630 424 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 KRT75O95678 551 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 KRT19P08727 400 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 ADORA2AP29274 412 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 FXR1P51114 621 aaKnown RBP eCLIP10.44□□□□□ -0.74
NUP50-214ENST00000469163 CASP5P51878 434 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 MRPS9P82933 396 aaKnown RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 COASYQ13057 564 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 AP3B2Q13367 1082 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 COL19A1Q14993 1142 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 UGCGQ16739 394 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 MYLK3Q32MK0 819 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 CCDC81Q6ZN84 652 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 RFPL4BQ6ZWI9 263 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 SATL1Q86VE3 508 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 THNSL1Q8IYQ7 743 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 GIMAP1Q8WWP7 306 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 CNOT6LQ96LI5 555 aaKnown RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 PNMA5Q96PV4 448 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 FAM129AQ9BZQ8 928 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 PXMP2Q9NR77 195 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 EPN1Q9Y6I3 576 aaPredicted RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 ROBO3Q96MS0 1386 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 FAM47E-STBD1D6RA91 191 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 ASAP2O43150 1006 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 CBFA2T3O75081 653 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 SUN1O94901 812 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 CHN1P15882 459 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 RCVRNP35243 200 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 KPNA1P52294 538 aaPredicted RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 NAALADL2Q58DX5 795 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 ARL6IP4Q66PJ3 421 aaKnown RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 DIS3LQ8TF46 1054 aaKnown RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 GAB3Q8WWW8 586 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 LRRC45Q96CN5 670 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 NT5C3AQ9H0P0 336 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 ARMC7Q9H6L4 198 aa10.44□□□□□ -0.74
NUP50-214ENST00000469163 CLK4Q9HAZ1 481 aaKnown RBP10.44□□□□□ -0.74
NUP50-214ENST00000469163 RGPD3A6NKT7 1758 aaPredicted RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 RGPD4Q7Z3J3 1758 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 MYO7AQ13402 2215 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 ANKRD31Q8N7Z5 1873 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 CES1P23141 567 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 YWHABP31946 246 aaKnown RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 RGS2P41220 211 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 GPC3P51654 580 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 FKBP1CQ5VVH2 108 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 ARHGEF2Q92974 986 aaKnown RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 BEGAINQ9BUH8 593 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 NDFIP2Q9NV92 336 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 PASKQ96RG2 1323 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 TLDC2A0PJX2 215 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 GLI1P08151 1106 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 MYL3P08590 195 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 ELNP15502 786 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 GM2AP17900 193 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 TCEA1P23193 301 aaKnown RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 BASP1P80723 227 aaKnown RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 ERMARDQ5T6L9 678 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 TWF2Q6IBS0 349 aaKnown RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 FASTKD5Q7L8L6 764 aaKnown RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 ANKMY2Q8IV38 441 aa10.43□□□□□ -0.74
NUP50-214ENST00000469163 INTS9Q9NV88 658 aaKnown RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 ADD3Q9UEY8 706 aaKnown RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 PRRC2BQ5JSZ5 2229 aaKnown RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 POLR2AP24928 1970 aaKnown RBP10.43□□□□□ -0.74
NUP50-214ENST00000469163 NKRFO15226 690 aaKnown RBP eCLIP10.42□□□□□ -0.74
NUP50-214ENST00000469163 SERPINB6P35237 376 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 ETFBP38117 255 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 CCNA1P78396 465 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 HSDL1Q3SXM5 330 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 B3GNT6Q6ZMB0 384 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 POMGNT1Q8WZA1 660 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 TMEM237Q96Q45 408 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 PRMT1Q99873 361 aaKnown RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 TUBGCP2Q9BSJ2 902 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms